RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TSGA10IPQ3SY00 556 aa12.67□□□□□ -0.38
SMAD4-214ENST00000592186 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
SMAD4-214ENST00000592186 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
SMAD4-214ENST00000592186 METTL16Q86W50 562 aaKnown RBP12.67□□□□□ -0.38
SMAD4-214ENST00000592186 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
SMAD4-214ENST00000592186 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
SMAD4-214ENST00000592186 TMEM39BQ9GZU3 492 aa12.67□□□□□ -0.38
SMAD4-214ENST00000592186 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
SMAD4-214ENST00000592186 TOMM70O94826 608 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 SEC24BO95487 1268 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 PLCD1P51178 756 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-214ENST00000592186 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 MFSD6Q6ZSS7 791 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 SH3BP5LQ7L8J4 393 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 KCNB2Q92953 911 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 CNNM2Q9H8M5 875 aa12.66□□□□□ -0.38
SMAD4-214ENST00000592186 KIF3CO14782 793 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 SLC27A2O14975 620 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
SMAD4-214ENST00000592186 CYP21A2P08686 494 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 DSG3P32926 999 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 ANAPC15P60006 121 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 TRDNQ13061 729 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 ZNF784Q8NCA9 323 aaPredicted RBP12.65□□□□□ -0.38
SMAD4-214ENST00000592186 SMC1BQ8NDV3 1235 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
SMAD4-214ENST00000592186 MKNK2Q9HBH9 465 aa12.65□□□□□ -0.38
SMAD4-214ENST00000592186 ADM5C9JUS6 153 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
SMAD4-214ENST00000592186 FGRP09769 529 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 HAND2P61296 217 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 GABPAQ06546 454 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 NBPF12Q5TAG4 269 aaPredicted RBP12.64□□□□□ -0.39
SMAD4-214ENST00000592186 C16orf86Q6ZW13 317 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
SMAD4-214ENST00000592186 STAG1Q8WVM7 1258 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 CCDC17Q96LX7 622 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
SMAD4-214ENST00000592186 C22orf23Q9BZE7 217 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 KRT23Q9C075 422 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMAD4-214ENST00000592186 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
SMAD4-214ENST00000592186 ROBO3Q96MS0 1386 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 CYP2D7A0A087X1C5 515 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 UNCXA6NJT0 531 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 ORC4O43929 436 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
SMAD4-214ENST00000592186 CYP2D6P10635 497 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 PSMA5P28066 241 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 CDK8P49336 464 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
SMAD4-214ENST00000592186 FSTL1Q12841 308 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 CDCA5Q96FF9 252 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 ZNF341Q9BYN7 854 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 SCAF8Q9UPN6 1271 aaKnown RBP12.63□□□□□ -0.39
SMAD4-214ENST00000592186 ECM29Q5VYK3 1845 aa12.63□□□□□ -0.39
SMAD4-214ENST00000592186 E7EWF7 191 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 FKBP1BP68106 108 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 PRAMEF18Q5VWM3 479 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 MIGA2Q7L4E1 593 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 ESR2Q92731 530 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 CTNND1O60716 968 aaKnown RBP12.62□□□□□ -0.39
SMAD4-214ENST00000592186 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
SMAD4-214ENST00000592186 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
SMAD4-214ENST00000592186 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 ARMC9Q7Z3E5 817 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
SMAD4-214ENST00000592186 IL17RAQ96F46 866 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 DYNLL2Q96FJ2 89 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 TM6SF1Q9BZW5 370 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 TOMM22Q9NS69 142 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 ZNF112Q9UJU3 913 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMAD4-214ENST00000592186 SNX14Q9Y5W7 946 aa12.62□□□□□ -0.39
SMAD4-214ENST00000592186 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
SMAD4-214ENST00000592186 SHMT1P34896 483 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 C2orf69Q8N8R5 385 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 MTA3Q9BTC8 594 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 CABP5Q9NP86 173 aa12.61□□□□□ -0.39
SMAD4-214ENST00000592186 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 TRAF5O00463 557 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms