RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
MBD1-225ENST00000591535 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
MBD1-225ENST00000591535 NACAP1Q9BZK3 213 aa16.88■□□□□ 0.29
MBD1-225ENST00000591535 USP17L12C9JPN9 530 aa16.87■□□□□ 0.29
MBD1-225ENST00000591535 USP17L21D6R901 530 aa16.87■□□□□ 0.29
MBD1-225ENST00000591535 ECE1P42892 770 aa16.87■□□□□ 0.29
MBD1-225ENST00000591535 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
MBD1-225ENST00000591535 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
MBD1-225ENST00000591535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.29
MBD1-225ENST00000591535 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
MBD1-225ENST00000591535 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
MBD1-225ENST00000591535 SERPINB13Q9UIV8 391 aa16.87■□□□□ 0.29
MBD1-225ENST00000591535 PCNTO95613 3336 aa16.87■□□□□ 0.29
MBD1-225ENST00000591535 TBC1D12O60347 775 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 CYP2D6P10635 497 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 VEGFBP49765 207 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 PLCD1P51178 756 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
MBD1-225ENST00000591535 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 CAPNS2Q96L46 248 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 ELP3Q9H9T3 547 aa16.86■□□□□ 0.29
MBD1-225ENST00000591535 UNCXA6NJT0 531 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 MINDY4BA8MYZ0 360 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 CHMLP26374 656 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 INPP5BP32019 993 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 MAP3K10Q02779 954 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 VGLL4Q14135 290 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 RUFY2Q8WXA3 655 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
MBD1-225ENST00000591535 OTOFQ9HC10 1997 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 CYP2D7A0A087X1C5 515 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 CTR9Q6PD62 1173 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
MBD1-225ENST00000591535 NAPBQ9H115 298 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
MBD1-225ENST00000591535 ZNF112Q9UJU3 913 aa16.85■□□□□ 0.29
MBD1-225ENST00000591535 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
MBD1-225ENST00000591535 MKRN3Q13064 507 aaKnown RBP16.84■□□□□ 0.29
MBD1-225ENST00000591535 C12orf60Q5U649 245 aa16.84■□□□□ 0.29
MBD1-225ENST00000591535 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
MBD1-225ENST00000591535 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
MBD1-225ENST00000591535 EHD4Q9H223 541 aa16.84■□□□□ 0.29
MBD1-225ENST00000591535 EPB41L4AQ9HCS5 686 aaPredicted RBP16.84■□□□□ 0.29
MBD1-225ENST00000591535 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
MBD1-225ENST00000591535 SIPA1L1O43166 1804 aa16.83■□□□□ 0.29
MBD1-225ENST00000591535 EVX2Q03828 476 aa16.83■□□□□ 0.28
MBD1-225ENST00000591535 METTL16Q86W50 562 aaKnown RBP16.83■□□□□ 0.28
MBD1-225ENST00000591535 PICK1Q9NRD5 415 aa16.83■□□□□ 0.28
MBD1-225ENST00000591535 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
MBD1-225ENST00000591535 AOC2O75106 756 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 SLC10A3P09131 477 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 HSPD1P10809 573 aaKnown RBP16.82■□□□□ 0.28
MBD1-225ENST00000591535 RASAL3Q86YV0 1011 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 STK11IPQ8N1F8 1099 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 DYNLL2Q96FJ2 89 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
MBD1-225ENST00000591535 NOGQ13253 232 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 OPTNQ96CV9 577 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 OTUD5Q96G74 571 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 FAM155AB1AL88 458 aaPredicted RBP16.81■□□□□ 0.28
MBD1-225ENST00000591535 SMIM22K7EJ46 135 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
MBD1-225ENST00000591535 ERO1BQ86YB8 467 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 RAD50Q92878 1312 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
MBD1-225ENST00000591535 FOXP2O15409 715 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 CDC45O75419 566 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 GDF11O95390 407 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 FGAP02671 866 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
MBD1-225ENST00000591535 CAP2P40123 477 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 RRP1BQ14684 758 aaKnown RBP16.8■□□□□ 0.28
MBD1-225ENST00000591535 NOL9Q5SY16 702 aaKnown RBP16.8■□□□□ 0.28
MBD1-225ENST00000591535 SPRYD7Q5W111 196 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 SLC44A5Q8NCS7 719 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 MYH8P13535 1937 aa16.8■□□□□ 0.28
MBD1-225ENST00000591535 SHMT1P34896 483 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 CDK8P49336 464 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 GABPAQ06546 454 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 ALX1Q15699 326 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 TATDN1Q6P1N9 297 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 IL25Q9H293 177 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 ZHX2Q9Y6X8 837 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 ATAD5Q96QE3 1844 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 DOCK1Q14185 1865 aa16.79■□□□□ 0.28
MBD1-225ENST00000591535 SPDYE5A6NIY4 337 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
MBD1-225ENST00000591535 SGSM2O43147 1006 aa16.78■□□□□ 0.28
MBD1-225ENST00000591535 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms