RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 RAD17O75943 681 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 USP17L8P0C7I0 530 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 CALM1P0DP23 149 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 CALM2P0DP24 149 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 CALM3P0DP25 149 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 PTMSP20962 102 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 GPR162Q16538 588 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 CFAP100Q494V2 611 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 CDC42EP5Q6NZY7 148 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 GBP4Q96PP9 640 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 LRRC2Q9BYS8 371 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 NBPF3Q9H094 633 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 KCNQ5Q9NR82 932 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 SCN9AQ15858 1988 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 KLF18A0A0U1RQI7 1052 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 CPLX1O14810 134 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 DDIT3P35638 169 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 APOBEC3HQ6NTF7 200 aaKnown RBP15.22■□□□□ 0.03
PTBP1-216ENST00000590887 ARHGAP27Q6ZUM4 889 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 MTMR14Q8NCE2 650 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 MXD3Q9BW11 206 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 TRIM34Q9BYJ4 488 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
PTBP1-216ENST00000590887 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.03
PTBP1-216ENST00000590887 CDK5RAP2Q96SN8 1893 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 GOLGA6L22H0YM25 854 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 NFKBIEO00221 500 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 ZBTB43O43298 467 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 GRIN3BO60391 1043 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 ENTPD3O75355 529 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
PTBP1-216ENST00000590887 ANTXR2P58335 489 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 CXCL9Q07325 125 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 PICALMQ13492 652 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 CYB5R4Q7L1T6 521 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 IGDCC4Q8TDY8 1250 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
PTBP1-216ENST00000590887 LARP6Q9BRS8 491 aaKnown RBP15.21■□□□□ 0.03
PTBP1-216ENST00000590887 OSBPL5Q9H0X9 879 aaPredicted RBP15.21■□□□□ 0.03
PTBP1-216ENST00000590887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.034e-7■■□□□ 13.4
PTBP1-216ENST00000590887 ECM29Q5VYK3 1845 aa15.21■□□□□ 0.03
PTBP1-216ENST00000590887 TSPY3P0CV98 308 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 TSPY8P0CW00 308 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 LMNB1P20700 586 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 METAP2P50579 478 aaKnown RBP eCLIP15.2■□□□□ 0.025e-8■■□□□ 14.5
PTBP1-216ENST00000590887 STK3Q13188 491 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 RAB3GAP1Q15042 981 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
PTBP1-216ENST00000590887 C16orf86Q6ZW13 317 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 CATIPQ7Z7H3 387 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 DGKHQ86XP1 1220 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 FOXP4Q8IVH2 680 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-216ENST00000590887 STK11IPQ8N1F8 1099 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 RGS22Q8NE09 1264 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 DPF2Q92785 391 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 GMLQ99445 158 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 EHD4Q9H223 541 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 TCP11L1Q9NUJ3 509 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 PI4KBQ9UBF8 816 aa15.2■□□□□ 0.02
PTBP1-216ENST00000590887 SAP30BPQ9UHR5 308 aaKnown RBP15.2■□□□□ 0.02
PTBP1-216ENST00000590887 GOLGA8BA8MQT2 603 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 FZD9O00144 591 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-216ENST00000590887 GJB2P29033 226 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 TNNI2P48788 182 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 FKBP1CQ5VVH2 108 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 NECAB1Q8N987 351 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 LY9Q9HBG7 655 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 SERPINB13Q9UIV8 391 aa15.19■□□□□ 0.02
PTBP1-216ENST00000590887 TNKSO95271 1327 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 ZNF646O15015 1829 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-216ENST00000590887 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 LARGE1O95461 756 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.029e-13■□□□□ 9.5
PTBP1-216ENST00000590887 CDK8P49336 464 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 TFAP4Q01664 338 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 SCRN1Q12765 414 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 LARP1BQ659C4 914 aaKnown RBP15.18■□□□□ 0.02
PTBP1-216ENST00000590887 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-216ENST00000590887 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-216ENST00000590887 WASF1Q92558 559 aa15.18■□□□□ 0.02
PTBP1-216ENST00000590887 RBM28Q9NW13 759 aaKnown RBP15.18■□□□□ 0.02
PTBP1-216ENST00000590887 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 GOLGA8AA7E2F4 631 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 H7C1D1 291 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 DDAH1O94760 285 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 CYP2D6P10635 497 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 CCT2P78371 535 aaKnown RBP15.17■□□□□ 0.02
PTBP1-216ENST00000590887 TNFAIP1Q13829 316 aa15.17■□□□□ 0.02
PTBP1-216ENST00000590887 APOA5Q6Q788 366 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms