RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MMP1P03956 469 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 NOSTRINQ8IVI9 506 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 MAP3K14Q99558 947 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 FOXP1Q9H334 677 aaPredicted RBP22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 CLIP2Q9UDT6 1046 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 SRP68Q9UHB9 627 aaKnown RBP22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 FAM237AA0A1B0GTK4 181 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 WDHD1O75717 1129 aaPredicted RBP22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 MARCKSP29966 332 aaPredicted RBP22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 SYKP43405 635 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 SEC23AQ15436 765 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 CCDC186Q7Z3E2 898 aa22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 DHX40Q8IX18 779 aaKnown RBP22.13■■□□□ 1.13
PRKCSH-209ENST00000589838 UBAP1LF5GYI3 381 aa22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 PTGS1P23219 599 aa22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 AKAP17AQ02040 695 aaKnown RBP22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 NBPF11Q86T75 865 aa22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 IQCA1Q86XH1 822 aa22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 NUP133Q8WUM0 1156 aa22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 TNKSO95271 1327 aa22.12■■□□□ 1.13
PRKCSH-209ENST00000589838 FGRP09769 529 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 CALM1P0DP23 149 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 CALM2P0DP24 149 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 CALM3P0DP25 149 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 XBP1P17861 261 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 NLRP12P59046 1061 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 TPM4P67936 248 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 STK11IPQ8N1F8 1099 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 NSUN4Q96CB9 384 aaKnown RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 ZSCAN10Q96SZ4 725 aaPredicted RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 RNF26Q9BY78 433 aaPredicted RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 CRNKL1Q9BZJ0 848 aaKnown RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 USP21Q9UK80 565 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 HPSEQ9Y251 543 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 MYH6P13533 1939 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 THSD7AQ9UPZ6 1657 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 DUOX1Q9NRD9 1551 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 DYNLL1P63167 89 aaKnown RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 RILPL1Q5EBL4 403 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 SPTY2D1Q68D10 685 aaPredicted RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 CATIPQ7Z7H3 387 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 RBM28Q9NW13 759 aaKnown RBP22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 MYH2Q9UKX2 1941 aa22.11■■□□□ 1.13
PRKCSH-209ENST00000589838 BAZ2AQ9UIF9 1905 aaKnown RBP22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 WTIPA6NIX2 430 aaPredicted RBP22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 NEMFO60524 1076 aa22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 RESP18Q5W5W9 173 aa22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 DIS3L2Q8IYB7 885 aaKnown RBP22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 PRIMPOLQ96LW4 560 aa22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 ATP8A2Q9NTI2 1148 aa22.1■■□□□ 1.13
PRKCSH-209ENST00000589838 SMTNL1A8MU46 457 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 MECOMQ03112 1051 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 PTF1AQ7RTS3 328 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 AOPEPQ8N6M6 819 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 MAST2Q6P0Q8 1798 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 TAF1LQ8IZX4 1826 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 NPHP1O15259 732 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 CTR9Q6PD62 1173 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 KRI1Q8N9T8 703 aaKnown RBP22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 TAOK2Q9UL54 1235 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 PYCARDQ9ULZ3 195 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 CEP131Q9UPN4 1083 aa22.09■■□□□ 1.13
PRKCSH-209ENST00000589838 DLEC1Q9Y238 1755 aa22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 BTBD18B2RXH4 712 aa22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 LY75O60449 1722 aa22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 GUCY1A2P33402 732 aa22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 SHC4Q6S5L8 630 aa22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 ELOA2Q8IYF1 753 aaPredicted RBP22.08■■□□□ 1.13
PRKCSH-209ENST00000589838 MROH7-TTC4A0A0A0MT08 1334 aa22.08■■□□□ 1.12
PRKCSH-209ENST00000589838 UQCRHLA0A096LP55 91 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 ORC4O43929 436 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 UQCRHP07919 91 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 RFC4P35249 363 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 NT5C2P49902 561 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 ENAHQ8N8S7 591 aaPredicted RBP22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 HOOK1Q9UJC3 728 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 TM4SF1P30408 202 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 TRAPPC3LQ5T215 181 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 ZNF384Q8TF68 577 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 ERCC4Q92889 916 aaPredicted RBP22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 NOL10Q9BSC4 688 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
PRKCSH-209ENST00000589838 USP17L12C9JPN9 530 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 USP17L21D6R901 530 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 PRPF3O43395 683 aaKnown RBP22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 DDAH1O94760 285 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 SBK1Q52WX2 424 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 FAM13BQ9NYF5 915 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 ARPP21Q9UBL0 812 aaPredicted RBP22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 TUBE1Q9UJT0 475 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 KCNJ14Q9UNX9 436 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 LEMD3Q9Y2U8 911 aa22.06■■□□□ 1.12
PRKCSH-209ENST00000589838 LAMB1P07942 1786 aa22.05■■□□□ 1.12
PRKCSH-209ENST00000589838 KLRK1P26718 216 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms