RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
NLE1-205ENST00000588642 TNFAIP1Q13829 316 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
NLE1-205ENST00000588642 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 FAM83AQ86UY5 434 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 MB21D2Q8IYB1 491 aaPredicted RBP16.59■□□□□ 0.25
NLE1-205ENST00000588642 ESR2Q92731 530 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 SNX21Q969T3 373 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 TCEANC2Q96MN5 208 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
NLE1-205ENST00000588642 ADAMTSL1Q8N6G6 1762 aa16.59■□□□□ 0.25
NLE1-205ENST00000588642 PRC1O43663 620 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 ORC4O43929 436 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 FGRP09769 529 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 CDK8P49336 464 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 HIRAP54198 1017 aaPredicted RBP16.58■□□□□ 0.24
NLE1-205ENST00000588642 C16orf86Q6ZW13 317 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 CHST3Q7LGC8 479 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
NLE1-205ENST00000588642 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
NLE1-205ENST00000588642 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.24
NLE1-205ENST00000588642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.58■□□□□ 0.24
NLE1-205ENST00000588642 DICER1Q9UPY3 1922 aaKnown RBP16.58■□□□□ 0.24
NLE1-205ENST00000588642 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 MCM2P49736 904 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 RASA3Q14644 834 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 ANGEL2Q5VTE6 544 aaKnown RBP16.57■□□□□ 0.24
NLE1-205ENST00000588642 Q6ZUG5 572 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
NLE1-205ENST00000588642 CYB5R4Q7L1T6 521 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
NLE1-205ENST00000588642 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
NLE1-205ENST00000588642 SLC44A5Q8NCS7 719 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 TTC14Q96N46 770 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 LRRC2Q9BYS8 371 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
NLE1-205ENST00000588642 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
NLE1-205ENST00000588642 ROBO3Q96MS0 1386 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
NLE1-205ENST00000588642 EPHX2P34913 555 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 AK2P54819 239 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 ANKRD1Q15327 319 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 APOBEC3FQ8IUX4 373 aaKnown RBP16.56■□□□□ 0.24
NLE1-205ENST00000588642 NKX2-3Q8TAU0 364 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 CSRNP1Q96S65 589 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 TBC1D2Q9BYX2 928 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 EHD4Q9H223 541 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 SWAP70Q9UH65 585 aa16.56■□□□□ 0.24
NLE1-205ENST00000588642 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
NLE1-205ENST00000588642 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 WDR19Q8NEZ3 1342 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 ANTXR2P58335 489 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 TFAP4Q01664 338 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 GABPAQ06546 454 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 USP50Q70EL3 339 aaPredicted RBP16.55■□□□□ 0.24
NLE1-205ENST00000588642 LARP6Q9BRS8 491 aaKnown RBP16.55■□□□□ 0.24
NLE1-205ENST00000588642 DEFB129Q9H1M3 183 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 TIAM2Q8IVF5 1701 aa16.55■□□□□ 0.24
NLE1-205ENST00000588642 TSPY2A6NKD2 308 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
NLE1-205ENST00000588642 RASA1P20936 1047 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 NT5C2P49902 561 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
NLE1-205ENST00000588642 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
NLE1-205ENST00000588642 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
NLE1-205ENST00000588642 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 UBAC1Q9BSL1 405 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
NLE1-205ENST00000588642 TAOK2Q9UL54 1235 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 LIMCH1Q9UPQ0 1083 aa16.54■□□□□ 0.24
NLE1-205ENST00000588642 ERICH2A1L162 156 aa16.53■□□□□ 0.24
NLE1-205ENST00000588642 K7ELQ4 463 aaPredicted RBP16.53■□□□□ 0.24
NLE1-205ENST00000588642 TSPY3P0CV98 308 aa16.53■□□□□ 0.24
NLE1-205ENST00000588642 TSPY8P0CW00 308 aa16.53■□□□□ 0.24
NLE1-205ENST00000588642 TOB2Q14106 344 aaPredicted RBP16.53■□□□□ 0.24
NLE1-205ENST00000588642 EAPPQ56P03 285 aaPredicted RBP16.53■□□□□ 0.24
NLE1-205ENST00000588642 IQCA1Q86XH1 822 aa16.53■□□□□ 0.24
NLE1-205ENST00000588642 BRF1Q92994 677 aa16.53■□□□□ 0.24
NLE1-205ENST00000588642 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
NLE1-205ENST00000588642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
NLE1-205ENST00000588642 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
NLE1-205ENST00000588642 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
NLE1-205ENST00000588642 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
NLE1-205ENST00000588642 POTECB2RU33 542 aa16.52■□□□□ 0.24
NLE1-205ENST00000588642 SLURP2P0DP57 97 aa16.52■□□□□ 0.24
NLE1-205ENST00000588642 SHMT1P34896 483 aa16.52■□□□□ 0.24
NLE1-205ENST00000588642 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
NLE1-205ENST00000588642 METTL16Q86W50 562 aaKnown RBP16.52■□□□□ 0.24
NLE1-205ENST00000588642 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
NLE1-205ENST00000588642 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
NLE1-205ENST00000588642 ZSCAN10Q96SZ4 725 aaPredicted RBP16.52■□□□□ 0.24
NLE1-205ENST00000588642 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms