RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NDUFB9Q9Y6M9 179 aa17.16■□□□□ 0.34
CCDC43-203ENST00000588210 GSTO1P78417 241 aa17.16■□□□□ 0.34
CCDC43-203ENST00000588210 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
CCDC43-203ENST00000588210 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
CCDC43-203ENST00000588210 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
CCDC43-203ENST00000588210 PIH1D3Q9NQM4 214 aaKnown RBP17.16■□□□□ 0.34
CCDC43-203ENST00000588210 ECM29Q5VYK3 1845 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 VPS37CA5D8V6 355 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-203ENST00000588210 LDHCP07864 332 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 PDCP20941 246 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 RPS6KB1P23443 525 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 APOBEC3HQ6NTF7 200 aaKnown RBP17.15■□□□□ 0.34
CCDC43-203ENST00000588210 BLOC1S2Q6QNY1 142 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 NECAB1Q8N987 351 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-203ENST00000588210 DAGLAQ9Y4D2 1042 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 ELP1O95163 1332 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 PASKQ96RG2 1323 aa17.15■□□□□ 0.34
CCDC43-203ENST00000588210 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
CCDC43-203ENST00000588210 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
CCDC43-203ENST00000588210 TDRD3Q9H7E2 651 aaKnown RBP17.14■□□□□ 0.33
CCDC43-203ENST00000588210 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 GAKO14976 1311 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
CCDC43-203ENST00000588210 GOLIM4O00461 696 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 SPDYE2Q495Y8 402 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 PAG1Q9NWQ8 432 aa17.14■□□□□ 0.33
CCDC43-203ENST00000588210 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
CCDC43-203ENST00000588210 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
CCDC43-203ENST00000588210 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-203ENST00000588210 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-203ENST00000588210 MROH7-TTC4A0A0A0MT08 1334 aa17.13■□□□□ 0.33
CCDC43-203ENST00000588210 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
CCDC43-203ENST00000588210 ADCY5O95622 1261 aa17.12■□□□□ 0.33
CCDC43-203ENST00000588210 KRT85P78386 507 aa17.12■□□□□ 0.33
CCDC43-203ENST00000588210 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
CCDC43-203ENST00000588210 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-203ENST00000588210 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-203ENST00000588210 VEZTQ9HBM0 779 aa17.12■□□□□ 0.33
CCDC43-203ENST00000588210 DOCK2Q92608 1830 aa17.12■□□□□ 0.33
CCDC43-203ENST00000588210 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 ADM5C9JUS6 153 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 TRAF5O00463 557 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 KDM4AO75164 1064 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 TNFAIP1Q13829 316 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-203ENST00000588210 KRT32Q14532 448 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 TMOD2Q9NZR1 351 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 MAST2Q6P0Q8 1798 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 MYO5AQ9Y4I1 1855 aaKnown RBP17.11■□□□□ 0.33
CCDC43-203ENST00000588210 CDC42EP5Q6NZY7 148 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 EDC3Q96F86 508 aaKnown RBP17.11■□□□□ 0.33
CCDC43-203ENST00000588210 PPP2R3BQ9Y5P8 575 aa17.11■□□□□ 0.33
CCDC43-203ENST00000588210 BTDP43251 543 aa17.1■□□□□ 0.33
CCDC43-203ENST00000588210 APLP1P51693 650 aa17.1■□□□□ 0.33
CCDC43-203ENST00000588210 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
CCDC43-203ENST00000588210 SCAF8Q9UPN6 1271 aaKnown RBP17.1■□□□□ 0.33
CCDC43-203ENST00000588210 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
CCDC43-203ENST00000588210 UQCRHLA0A096LP55 91 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 UQCRHP07919 91 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 HSPA6P17066 643 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 TNNI2P48788 182 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 MAGEB6Q8N7X4 407 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
CCDC43-203ENST00000588210 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCDC43-203ENST00000588210 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 PDCL3Q9H2J4 239 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 DTNBO60941 627 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 BAG3O95817 575 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 CYP7A1P22680 504 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
CCDC43-203ENST00000588210 CCDC192P0DO97 292 aa17.08■□□□□ 0.33
CCDC43-203ENST00000588210 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.33
CCDC43-203ENST00000588210 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.33
CCDC43-203ENST00000588210 CDCA5Q96FF9 252 aa17.08■□□□□ 0.33
CCDC43-203ENST00000588210 TCP10L2B9ZVM9 353 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 PPP4CP60510 307 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 RASA3Q14644 834 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 ZSCAN25Q6NSZ9 544 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 FAM83AQ86UY5 434 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 TCEANC2Q96MN5 208 aa17.08■□□□□ 0.32
CCDC43-203ENST00000588210 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-203ENST00000588210 TRPM7Q96QT4 1865 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 DYNC1I1O14576 645 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
CCDC43-203ENST00000588210 PDE6AP16499 860 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 CACNB3P54284 484 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 ADGRA1Q86SQ6 560 aa17.07■□□□□ 0.32
CCDC43-203ENST00000588210 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms