RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 SLFNL1Q499Z3 407 aa23.13■■□□□ 1.29
TPM4-204ENST00000586499 HAUS7Q99871 368 aa23.13■■□□□ 1.29
TPM4-204ENST00000586499 PI4KBQ9UBF8 816 aa23.13■■□□□ 1.29
TPM4-204ENST00000586499 ZNF532Q9HCE3 1301 aa23.12■■□□□ 1.29
TPM4-204ENST00000586499 MOGSQ13724 837 aa23.12■■□□□ 1.29
TPM4-204ENST00000586499 RIOK1Q9BRS2 568 aaKnown RBP23.12■■□□□ 1.29
TPM4-204ENST00000586499 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
TPM4-204ENST00000586499 FOCADQ5VW36 1801 aa23.12■■□□□ 1.29
TPM4-204ENST00000586499 SIPA1L1O43166 1804 aa23.11■■□□□ 1.29
TPM4-204ENST00000586499 CHGBP05060 677 aa23.11■■□□□ 1.29
TPM4-204ENST00000586499 USP5P45974 858 aa23.11■■□□□ 1.29
TPM4-204ENST00000586499 ZFYVE28Q9HCC9 887 aa23.11■■□□□ 1.29
TPM4-204ENST00000586499 AFG3L2Q9Y4W6 797 aa23.11■■□□□ 1.29
TPM4-204ENST00000586499 MAGEB6P1A0A0J9YX57 407 aa23.1■■□□□ 1.29
TPM4-204ENST00000586499 TCRBV5S4A2TA0A5A2 114 aa23.1■■□□□ 1.29
TPM4-204ENST00000586499 CAP1Q01518 475 aa23.1■■□□□ 1.29
TPM4-204ENST00000586499 TSHZ3Q63HK5 1081 aa23.1■■□□□ 1.29
TPM4-204ENST00000586499 DNAJC18Q9H819 358 aa23.1■■□□□ 1.29
TPM4-204ENST00000586499 HERC5Q9UII4 1024 aaKnown RBP23.1■■□□□ 1.29
TPM4-204ENST00000586499 DOCK1Q14185 1865 aa23.09■■□□□ 1.29
TPM4-204ENST00000586499 CXCL11O14625 94 aa23.09■■□□□ 1.29
TPM4-204ENST00000586499 TMED8Q6PL24 325 aaPredicted RBP23.09■■□□□ 1.29
TPM4-204ENST00000586499 CD99L2Q8TCZ2 262 aa23.09■■□□□ 1.29
TPM4-204ENST00000586499 ECHDC1Q9NTX5 307 aa23.09■■□□□ 1.29
TPM4-204ENST00000586499 PDHXO00330 501 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 CAP2P40123 477 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 JAG1P78504 1218 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 SP3Q02447 781 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 GPAT2Q6NUI2 795 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 ANKRD23Q86SG2 305 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 METTL16Q86W50 562 aaKnown RBP23.08■■□□□ 1.29
TPM4-204ENST00000586499 CERS3Q8IU89 383 aa23.08■■□□□ 1.29
TPM4-204ENST00000586499 FOXP4Q8IVH2 680 aaPredicted RBP23.08■■□□□ 1.29
TPM4-204ENST00000586499 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.29
TPM4-204ENST00000586499 TRIM75PA6NK02 468 aa23.07■■□□□ 1.28
TPM4-204ENST00000586499 SHROOM1Q2M3G4 852 aaPredicted RBP23.07■■□□□ 1.28
TPM4-204ENST00000586499 ZCCHC17Q9NP64 241 aaKnown RBP23.07■■□□□ 1.28
TPM4-204ENST00000586499 TRIM17Q9Y577 477 aa23.07■■□□□ 1.28
TPM4-204ENST00000586499 PHIPQ8WWQ0 1821 aa23.07■■□□□ 1.28
TPM4-204ENST00000586499 A0A0G2JLL6 359 aaPredicted RBP23.06■■□□□ 1.28
TPM4-204ENST00000586499 TLR2O60603 784 aa23.06■■□□□ 1.28
TPM4-204ENST00000586499 ADD2P35612 726 aa23.06■■□□□ 1.28
TPM4-204ENST00000586499 PRRT2Q7Z6L0 340 aaPredicted RBP23.06■■□□□ 1.28
TPM4-204ENST00000586499 LCORLQ8N3X6 602 aa23.06■■□□□ 1.28
TPM4-204ENST00000586499 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
TPM4-204ENST00000586499 MYH1P12882 1939 aa23.06■■□□□ 1.28
TPM4-204ENST00000586499 HLA-DOAP06340 250 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 PKN2Q16513 984 aaKnown RBP23.05■■□□□ 1.28
TPM4-204ENST00000586499 GADL1Q6ZQY3 521 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 OTOP1Q7RTM1 612 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 ERO1AQ96HE7 468 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 ARMT1Q9H993 441 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 HPS5Q9UPZ3 1129 aa23.05■■□□□ 1.28
TPM4-204ENST00000586499 ATAD5Q96QE3 1844 aa23.04■■□□□ 1.28
TPM4-204ENST00000586499 GDF11O95390 407 aa23.04■■□□□ 1.28
TPM4-204ENST00000586499 EVX2Q03828 476 aa23.04■■□□□ 1.28
TPM4-204ENST00000586499 SPP2Q13103 211 aa23.04■■□□□ 1.28
TPM4-204ENST00000586499 SDR42E1Q8WUS8 393 aa23.04■■□□□ 1.28
TPM4-204ENST00000586499 CRNKL1Q9BZJ0 848 aaKnown RBP23.04■■□□□ 1.28
TPM4-204ENST00000586499 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.04■■□□□ 1.28
TPM4-204ENST00000586499 MBD4O95243 580 aa23.03■■□□□ 1.28
TPM4-204ENST00000586499 CYP2C8P10632 490 aa23.03■■□□□ 1.28
TPM4-204ENST00000586499 PLCD1P51178 756 aa23.03■■□□□ 1.28
TPM4-204ENST00000586499 FBXO46Q6PJ61 603 aaPredicted RBP23.03■■□□□ 1.28
TPM4-204ENST00000586499 FASTKD5Q7L8L6 764 aaKnown RBP23.03■■□□□ 1.28
TPM4-204ENST00000586499 CPA4Q9UI42 421 aa23.03■■□□□ 1.28
TPM4-204ENST00000586499 USP17L5A8MUK1 530 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 PRKAB2O43741 272 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 ECM2O94769 699 aaPredicted RBP23.02■■□□□ 1.28
TPM4-204ENST00000586499 C17orf99Q6UX52 265 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 ZNF280CQ8ND82 737 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 GPATCH3Q96I76 525 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 EFCC1Q9HA90 598 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 PTPRFP10586 1907 aa23.02■■□□□ 1.28
TPM4-204ENST00000586499 UBE3CQ15386 1083 aa23.01■■□□□ 1.27
TPM4-204ENST00000586499 ARHGAP39Q9C0H5 1083 aa23.01■■□□□ 1.27
TPM4-204ENST00000586499 DCP1AQ9NPI6 582 aaPredicted RBP23.01■■□□□ 1.27
TPM4-204ENST00000586499 SERPINB13Q9UIV8 391 aa23.01■■□□□ 1.27
TPM4-204ENST00000586499 SUPT16HQ9Y5B9 1047 aaKnown RBP23.01■■□□□ 1.27
TPM4-204ENST00000586499 ADGRA2Q96PE1 1338 aa23.01■■□□□ 1.27
TPM4-204ENST00000586499 POLR3DP05423 398 aaPredicted RBP23■■□□□ 1.27
TPM4-204ENST00000586499 ASNSP08243 561 aa23■■□□□ 1.27
TPM4-204ENST00000586499 HDAC1Q13547 482 aaPredicted RBP23■■□□□ 1.27
TPM4-204ENST00000586499 TREML2Q5T2D2 321 aa23■■□□□ 1.27
TPM4-204ENST00000586499 ANKRD45Q5TZF3 282 aa23■■□□□ 1.27
TPM4-204ENST00000586499 TTC6Q86TZ1 520 aa23■■□□□ 1.27
TPM4-204ENST00000586499 PUS7LQ9H0K6 701 aaKnown RBP23■■□□□ 1.27
TPM4-204ENST00000586499 MCM9Q9NXL9 1143 aa23■■□□□ 1.27
TPM4-204ENST00000586499 CYP2D6P10635 497 aa22.99■■□□□ 1.27
TPM4-204ENST00000586499 HMGCS2P54868 508 aa22.99■■□□□ 1.27
TPM4-204ENST00000586499 PI4K2BQ8TCG2 481 aa22.99■■□□□ 1.27
TPM4-204ENST00000586499 EHD4Q9H223 541 aa22.99■■□□□ 1.27
TPM4-204ENST00000586499 ZBTB21Q9ULJ3 1066 aa22.99■■□□□ 1.27
TPM4-204ENST00000586499 PTPN22Q9Y2R2 807 aa22.99■■□□□ 1.27
TPM4-204ENST00000586499 DDX60LQ5H9U9 1706 aaKnown RBP22.99■■□□□ 1.27
TPM4-204ENST00000586499 ZSWIM8A7E2V4 1837 aa22.98■■□□□ 1.27
TPM4-204ENST00000586499 NAV1Q8NEY1 1877 aa22.98■■□□□ 1.27
TPM4-204ENST00000586499 MYH7P12883 1935 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms