RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 USP5P45974 858 aa24.78■■□□□ 1.56
SS18-224ENST00000584083 PAG1Q9NWQ8 432 aa24.78■■□□□ 1.56
SS18-224ENST00000584083 SAP30BPQ9UHR5 308 aaKnown RBP24.78■■□□□ 1.56
SS18-224ENST00000584083 KCNH4Q9UQ05 1017 aa24.78■■□□□ 1.56
SS18-224ENST00000584083 HAUS7Q99871 368 aa24.77■■□□□ 1.56
SS18-224ENST00000584083 HERC5Q9UII4 1024 aaKnown RBP24.77■■□□□ 1.56
SS18-224ENST00000584083 PALD1Q9ULE6 856 aa24.77■■□□□ 1.56
SS18-224ENST00000584083 ATAD5Q96QE3 1844 aa24.77■■□□□ 1.56
SS18-224ENST00000584083 MAGEB6P1A0A0J9YX57 407 aa24.76■■□□□ 1.55
SS18-224ENST00000584083 CXCL11O14625 94 aa24.76■■□□□ 1.55
SS18-224ENST00000584083 CRACR2BQ8N4Y2 399 aaPredicted RBP24.76■■□□□ 1.55
SS18-224ENST00000584083 TRIM34Q9BYJ4 488 aa24.76■■□□□ 1.55
SS18-224ENST00000584083 ZCCHC17Q9NP64 241 aaKnown RBP24.76■■□□□ 1.55
SS18-224ENST00000584083 SIPA1L1O43166 1804 aa24.75■■□□□ 1.55
SS18-224ENST00000584083 PKN2Q16513 984 aaKnown RBP24.75■■□□□ 1.55
SS18-224ENST00000584083 GPATCH3Q96I76 525 aa24.75■■□□□ 1.55
SS18-224ENST00000584083 ECHDC1Q9NTX5 307 aa24.75■■□□□ 1.55
SS18-224ENST00000584083 ZNF532Q9HCE3 1301 aa24.75■■□□□ 1.55
SS18-224ENST00000584083 PHIPQ8WWQ0 1821 aa24.75■■□□□ 1.55
SS18-224ENST00000584083 HLA-DOAP06340 250 aa24.74■■□□□ 1.55
SS18-224ENST00000584083 SP3Q02447 781 aa24.74■■□□□ 1.55
SS18-224ENST00000584083 SLC4A8Q2Y0W8 1093 aa24.74■■□□□ 1.55
SS18-224ENST00000584083 FOXP4Q8IVH2 680 aaPredicted RBP24.74■■□□□ 1.55
SS18-224ENST00000584083 ERO1AQ96HE7 468 aa24.74■■□□□ 1.55
SS18-224ENST00000584083 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.74■■□□□ 1.55
SS18-224ENST00000584083 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.74■■□□□ 1.55
SS18-224ENST00000584083 AFG3L2Q9Y4W6 797 aa24.74■■□□□ 1.55
SS18-224ENST00000584083 MYH7P12883 1935 aa24.74■■□□□ 1.55
SS18-224ENST00000584083 CAP2P40123 477 aa24.73■■□□□ 1.55
SS18-224ENST00000584083 ANKRD23Q86SG2 305 aa24.73■■□□□ 1.55
SS18-224ENST00000584083 CCDC84Q86UT8 332 aaPredicted RBP24.73■■□□□ 1.55
SS18-224ENST00000584083 RIOK1Q9BRS2 568 aaKnown RBP24.73■■□□□ 1.55
SS18-224ENST00000584083 PDHXO00330 501 aa24.72■■□□□ 1.55
SS18-224ENST00000584083 CD99L2Q8TCZ2 262 aa24.72■■□□□ 1.55
SS18-224ENST00000584083 PTPRFP10586 1907 aa24.72■■□□□ 1.55
SS18-224ENST00000584083 TCRBV5S4A2TA0A5A2 114 aa24.71■■□□□ 1.55
SS18-224ENST00000584083 TRIM75PA6NK02 468 aa24.71■■□□□ 1.55
SS18-224ENST00000584083 MOGSQ13724 837 aa24.71■■□□□ 1.55
SS18-224ENST00000584083 RRP1BQ14684 758 aaKnown RBP24.71■■□□□ 1.55
SS18-224ENST00000584083 GADL1Q6ZQY3 521 aa24.71■■□□□ 1.55
SS18-224ENST00000584083 FASTKD5Q7L8L6 764 aaKnown RBP24.71■■□□□ 1.55
SS18-224ENST00000584083 CRNKL1Q9BZJ0 848 aaKnown RBP24.71■■□□□ 1.55
SS18-224ENST00000584083 TRIM17Q9Y577 477 aa24.71■■□□□ 1.55
SS18-224ENST00000584083 A0A0G2JLL6 359 aaPredicted RBP24.7■■□□□ 1.54
SS18-224ENST00000584083 TLR2O60603 784 aa24.7■■□□□ 1.54
SS18-224ENST00000584083 ADD2P35612 726 aa24.7■■□□□ 1.54
SS18-224ENST00000584083 PRRT2Q7Z6L0 340 aaPredicted RBP24.7■■□□□ 1.54
SS18-224ENST00000584083 NAV1Q8NEY1 1877 aa24.69■■□□□ 1.54
SS18-224ENST00000584083 FBXO46Q6PJ61 603 aaPredicted RBP24.69■■□□□ 1.54
SS18-224ENST00000584083 OTOP1Q7RTM1 612 aa24.69■■□□□ 1.54
SS18-224ENST00000584083 METTL16Q86W50 562 aaKnown RBP24.69■■□□□ 1.54
SS18-224ENST00000584083 ZBTB47Q9UFB7 747 aaPredicted RBP24.69■■□□□ 1.54
SS18-224ENST00000584083 USP17L5A8MUK1 530 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 SPP2Q13103 211 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 SLFNL1Q499Z3 407 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 TSHZ3Q63HK5 1081 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 GPAT2Q6NUI2 795 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 TTC6Q86TZ1 520 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 DNAJC18Q9H819 358 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 HPS5Q9UPZ3 1129 aa24.68■■□□□ 1.54
SS18-224ENST00000584083 POLR3DP05423 398 aaPredicted RBP24.67■■□□□ 1.54
SS18-224ENST00000584083 ASNSP08243 561 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 ZSCAN25Q6NSZ9 544 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 LCORLQ8N3X6 602 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 ZNF280CQ8ND82 737 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 TBC1D2Q9BYX2 928 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 ARMT1Q9H993 441 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 EFCC1Q9HA90 598 aa24.67■■□□□ 1.54
SS18-224ENST00000584083 MBD4O95243 580 aa24.66■■□□□ 1.54
SS18-224ENST00000584083 ARHGEF6Q15052 776 aa24.66■■□□□ 1.54
SS18-224ENST00000584083 PARK7Q99497 189 aaKnown RBP24.66■■□□□ 1.54
SS18-224ENST00000584083 AS3MTQ9HBK9 375 aa24.66■■□□□ 1.54
SS18-224ENST00000584083 CPA4Q9UI42 421 aa24.66■■□□□ 1.54
SS18-224ENST00000584083 SERPINB13Q9UIV8 391 aa24.66■■□□□ 1.54
SS18-224ENST00000584083 GDF11O95390 407 aa24.65■■□□□ 1.54
SS18-224ENST00000584083 AAMPQ13685 434 aa24.65■■□□□ 1.54
SS18-224ENST00000584083 KIF22Q14807 665 aa24.65■■□□□ 1.54
SS18-224ENST00000584083 UBE3CQ15386 1083 aa24.65■■□□□ 1.54
SS18-224ENST00000584083 SDR42E1Q8WUS8 393 aa24.65■■□□□ 1.54
SS18-224ENST00000584083 MCM9Q9NXL9 1143 aa24.65■■□□□ 1.54
SS18-224ENST00000584083 CHGBP05060 677 aa24.64■■□□□ 1.54
SS18-224ENST00000584083 HDAC1Q13547 482 aaPredicted RBP24.64■■□□□ 1.54
SS18-224ENST00000584083 ANKRD45Q5TZF3 282 aa24.64■■□□□ 1.54
SS18-224ENST00000584083 EHD4Q9H223 541 aa24.64■■□□□ 1.54
SS18-224ENST00000584083 CYP2C8P10632 490 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 PLCD1P51178 756 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 JAG1P78504 1218 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 C17orf99Q6UX52 265 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 GCC1Q96CN9 775 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 GINM1Q9NU53 330 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 ZBTB21Q9ULJ3 1066 aa24.63■■□□□ 1.53
SS18-224ENST00000584083 DDX60LQ5H9U9 1706 aaKnown RBP24.63■■□□□ 1.53
SS18-224ENST00000584083 BAZ2AQ9UIF9 1905 aaKnown RBP24.63■■□□□ 1.53
SS18-224ENST00000584083 TTC41PQ6P2S7 1318 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 ERC2O15083 957 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 HMGCS2P54868 508 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 CAP1Q01518 475 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 SHROOM1Q2M3G4 852 aaPredicted RBP24.62■■□□□ 1.53
SS18-224ENST00000584083 KBTBD3Q8NAB2 608 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 OTUD7AQ8TE49 926 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms