RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 KRT23Q9C075 422 aa19.8■□□□□ 0.76
CDK5RAP3-230ENST00000584042 CYP46A1Q9Y6A2 500 aa19.8■□□□□ 0.76
CDK5RAP3-230ENST00000584042 TCP10L2B9ZVM9 353 aa19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 ORC4O43929 436 aa19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 PLCD1P51178 756 aa19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 TCP10Q12799 353 aa19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 RUFY3Q7L099 469 aa19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 UPF3BQ9BZI7 483 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 ZNF287Q9HBT7 754 aa19.79■□□□□ 0.76
CDK5RAP3-230ENST00000584042 SMIM22K7EJ46 135 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 ST18O60284 1047 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 RPS6KB1P23443 525 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 EVX2Q03828 476 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 GABPAQ06546 454 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 SLC4A8Q2Y0W8 1093 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 USP50Q70EL3 339 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 ZFPM1Q8IX07 1006 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 GGA3Q9NZ52 723 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 SWAP70Q9UH65 585 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 SERPINB13Q9UIV8 391 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 TACC3Q9Y6A5 838 aa19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 GREB1LQ9C091 1923 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-230ENST00000584042 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 EPHX2P34913 555 aa19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 NEK4P51957 841 aa19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 HIRAP54198 1017 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 DHX32Q7L7V1 743 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 SH3BP5LQ7L8J4 393 aa19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 TTC14Q96N46 770 aa19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 PPP2R3BQ9Y5P8 575 aa19.77■□□□□ 0.76
CDK5RAP3-230ENST00000584042 ASTN2O75129 1339 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PLIN4Q96Q06 1357 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 B4E1Z4 1266 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ANGEL2Q5VTE6 544 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 METTL16Q86W50 562 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ZSCAN29Q8IWY8 852 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ESR2Q92731 530 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 SNX21Q969T3 373 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 DYNLL2Q96FJ2 89 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 CSRNP1Q96S65 589 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 MTA3Q9BTC8 594 aa19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TAF1DQ9H5J8 278 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-230ENST00000584042 MCM5P33992 734 aa19.75■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ZC3H15Q8WU90 426 aaKnown RBP19.75■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ALDH8A1Q9H2A2 487 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TOMM22Q9NS69 142 aa19.75■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PGAP2Q9UHJ9 254 aa19.75■□□□□ 0.75
CDK5RAP3-230ENST00000584042 HERC5Q9UII4 1024 aaKnown RBP19.75■□□□□ 0.75
CDK5RAP3-230ENST00000584042 CPA1P15085 419 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 CDK8P49336 464 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 MCM2P49736 904 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ANTXR2P58335 489 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 EXOSC10Q01780 885 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 RASA3Q14644 834 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 RRP12Q5JTH9 1297 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 FBXL16Q8N461 479 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 CRACR2BQ8N4Y2 399 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 SLC44A5Q8NCS7 719 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TMEM39BQ9GZU3 492 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PDRG1Q9NUG6 133 aa19.74■□□□□ 0.75
CDK5RAP3-230ENST00000584042 POTECB2RU33 542 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PRC1O43663 620 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 KDM4AO75164 1064 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PRDM1O75626 825 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PNMA8AQ86V59 439 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 FOXP4Q8IVH2 680 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 STK11IPQ8N1F8 1099 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TEPSINQ96N21 525 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 AGXT2Q9BYV1 514 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 DNAJC18Q9H819 358 aa19.73■□□□□ 0.75
CDK5RAP3-230ENST00000584042 RASA1P20936 1047 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 SHMT1P34896 483 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 ANKRD1Q15327 319 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 CYB5R4Q7L1T6 521 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 HSCBQ8IWL3 235 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TMEM87BQ96K49 555 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TRIM34Q9BYJ4 488 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 DEFB129Q9H1M3 183 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 MKNK2Q9HBH9 465 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 INCENPQ9NQS7 918 aa19.72■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TBC1D12O60347 775 aa19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 RANBP6O60518 1105 aaKnown RBP19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 AK2P54819 239 aa19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 NKX2-3Q8TAU0 364 aa19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 HOOK2Q96ED9 719 aa19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 TCEANC2Q96MN5 208 aa19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 POLR2AP24928 1970 aaKnown RBP19.71■□□□□ 0.75
CDK5RAP3-230ENST00000584042 PAPPA2Q9BXP8 1791 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ATAD5Q96QE3 1844 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TSPY2A6NKD2 308 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SH2B2O14492 632 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 CD2BP2O95400 341 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 BECN1Q14457 450 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SART3Q15020 963 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TATDN1Q6P1N9 297 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 Q6ZUG5 572 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 IQCA1Q86XH1 822 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 CDAN1Q8IWY9 1227 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms