RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 A0A1B0GUL6 1792 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 LAMA2P24043 3122 aaKnown RBP8.07□□□□□ -1.12
NUP85-221ENST00000583548 PRR33A8MZF0 331 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 SMIM22K7EJ46 135 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 ENTPD3O75355 529 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 RAG1P15918 1043 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 CNGA1P29973 690 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
NUP85-221ENST00000583548 MAP3K10Q02779 954 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 RAB30Q15771 203 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 NEUROD2Q15784 382 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 GRIK5Q16478 980 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 TRIM60Q495X7 471 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
NUP85-221ENST00000583548 USP6NLQ92738 828 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 STK31Q9BXU1 1019 aa8.06□□□□□ -1.12
NUP85-221ENST00000583548 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
NUP85-221ENST00000583548 ERC2O15083 957 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 CLTBP09497 229 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 CASP7P55210 303 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 CALD1Q05682 793 aaKnown RBP8.05□□□□□ -1.12
NUP85-221ENST00000583548 MORN1Q5T089 497 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 CDC42EP5Q6NZY7 148 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 FBXO33Q7Z6M2 555 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 PLEKHH3Q7Z736 793 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 ZSCAN29Q8IWY8 852 aaPredicted RBP8.05□□□□□ -1.12
NUP85-221ENST00000583548 ZNF280CQ8ND82 737 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 HERVK_113Q902F9 699 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 MBIPQ9NS73 344 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 MSRAQ9UJ68 235 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 COG5Q9UP83 839 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 ATRNL1Q5VV63 1379 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 PLXNB2O15031 1838 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 DOCK3Q8IZD9 2030 aa8.05□□□□□ -1.12
NUP85-221ENST00000583548 FRMPD3Q5JV73 1810 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 PTPRFP10586 1907 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 ELL2O00472 640 aaPredicted RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 KIAA0355O15063 1070 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 ZEB1P37275 1124 aaPredicted RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 GNAI1P63096 354 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 NHLH1Q02575 133 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 C1QBPQ07021 282 aaKnown RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 NFIAQ12857 509 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 SPP2Q13103 211 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 MAP2K5Q13163 448 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 CCL14Q16627 93 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 SH3D19Q5HYK7 790 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 GPR142Q7Z601 462 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 LINS1Q8NG48 757 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 WDR66Q8TBY9 1149 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 TRIM43Q96BQ3 446 aaPredicted RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 EDC3Q96F86 508 aaKnown RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 PBX4Q9BYU1 374 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 OSBPL5Q9H0X9 879 aaPredicted RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 SLC28A3Q9HAS3 691 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.04□□□□□ -1.12
NUP85-221ENST00000583548 AS3MTQ9HBK9 375 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 C11orf16Q9NQ32 467 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 FAM198AQ9UFP1 575 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 IQSEC3Q9UPP2 1182 aaPredicted RBP8.04□□□□□ -1.12
NUP85-221ENST00000583548 TRIM35Q9UPQ4 493 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 DAGLAQ9Y4D2 1042 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 DOCK1Q14185 1865 aa8.04□□□□□ -1.12
NUP85-221ENST00000583548 MROH5Q6ZUA9 1318 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 LOC285556D6RIA3 1793 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 PI4K2BG5E9Z4 385 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 HOXA7P31268 230 aaPredicted RBP8.03□□□□□ -1.12
NUP85-221ENST00000583548 KCNQ1P51787 676 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 HMGCS2P54868 508 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 HERVK_113P62684 666 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 CCNA1P78396 465 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 TLE2Q04725 743 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 ADGRE1Q14246 886 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
NUP85-221ENST00000583548 GJC2Q5T442 439 aaPredicted RBP8.03□□□□□ -1.12
NUP85-221ENST00000583548 SH3RF1Q7Z6J0 888 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 IDI2Q9BXS1 227 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 MTIF3Q9H2K0 278 aaKnown RBP8.03□□□□□ -1.12
NUP85-221ENST00000583548 USP40Q9NVE5 1235 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 IFT57Q9NWB7 429 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 TMOD4Q9NZQ9 345 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 CDH23Q9H251 3354 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 AK9Q5TCS8 1911 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 DOCK2Q92608 1830 aa8.03□□□□□ -1.12
NUP85-221ENST00000583548 FAM86C2PA6NEL3 165 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 USP17L5A8MUK1 530 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 ST18O60284 1047 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 TBC1D12O60347 775 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 HOXC6P09630 235 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 EPHB4P54760 987 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 ERVK-9P63128 1117 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 ERVK-24P63145 666 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 FOXO4P98177 505 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 TFF2Q03403 129 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 PPIGQ13427 754 aaKnown RBP eCLIP8.02□□□□□ -1.133e-7■■■■□ 21.6
NUP85-221ENST00000583548 CSPP1Q1MSJ5 1256 aa8.02□□□□□ -1.13
NUP85-221ENST00000583548 LMBR1LQ6UX01 489 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms