RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 HOOK2Q96ED9 719 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 EHD4Q9H223 541 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 DDX4Q9NQI0 724 aaKnown RBP12.43□□□□□ -0.42
CCDC47-203ENST00000580986 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 RASA3Q14644 834 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-203ENST00000580986 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 KIAA1211Q6ZU35 1233 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 KRT26Q7Z3Y9 468 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
CCDC47-203ENST00000580986 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-203ENST00000580986 SDR42E1Q8WUS8 393 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 MAP4K1Q92918 833 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 TEPSINQ96N21 525 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-203ENST00000580986 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
CCDC47-203ENST00000580986 BAZ2AQ9UIF9 1905 aaKnown RBP12.42□□□□□ -0.42
CCDC47-203ENST00000580986 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 POLR2AP24928 1970 aaKnown RBP12.41□□□□□ -0.42
CCDC47-203ENST00000580986 ASTN2O75129 1339 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-203ENST00000580986 TCP10L2B9ZVM9 353 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 PRKAB2O43741 272 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 TBC1D12O60347 775 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 TOMM70O94826 608 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 PCP11498 1178 aaKnown RBP12.41□□□□□ -0.42
CCDC47-203ENST00000580986 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 TTC6Q86TZ1 520 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
CCDC47-203ENST00000580986 NAPBQ9H115 298 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 PI4KBQ9UBF8 816 aa12.41□□□□□ -0.42
CCDC47-203ENST00000580986 HERC5Q9UII4 1024 aaKnown RBP12.41□□□□□ -0.42
CCDC47-203ENST00000580986 FGAP02671 866 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 HLA-DOAP06340 250 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 TDO2P48775 406 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 CACNB3P54284 484 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 PICALMQ13492 652 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 SUPT20HL1Q3ZLR7 823 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 MCM9Q9NXL9 1143 aa12.4□□□□□ -0.42
CCDC47-203ENST00000580986 PAPPA2Q9BXP8 1791 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 USP17L21D6R901 530 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 APPP05067 770 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 GABPAQ06546 454 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 TCP10Q12799 353 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 FSTL1Q12841 308 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 SH3BP5LQ7L8J4 393 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
CCDC47-203ENST00000580986 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 CSRNP1Q96S65 589 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 ANO2Q9NQ90 1003 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 TRPM7Q96QT4 1865 aa12.39□□□□□ -0.43
CCDC47-203ENST00000580986 DDTLA6NHG4 134 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-203ENST00000580986 UNCXA6NJT0 531 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 ITGBL1O95965 494 aaPredicted RBP12.38□□□□□ -0.43
CCDC47-203ENST00000580986 FGRP09769 529 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 FKBP1BP68106 108 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 PTH1RQ03431 593 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 NECTIN1Q15223 517 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 IMMTQ16891 758 aaKnown RBP12.38□□□□□ -0.43
CCDC47-203ENST00000580986 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 ZNF287Q9HBT7 754 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 SWAP70Q9UH65 585 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 SERPINB13Q9UIV8 391 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 PALD1Q9ULE6 856 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 SSC5DA1L4H1 1573 aa12.38□□□□□ -0.43
CCDC47-203ENST00000580986 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
CCDC47-203ENST00000580986 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
CCDC47-203ENST00000580986 PYGBP11216 843 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 NF2P35240 595 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 PPARAQ07869 468 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
CCDC47-203ENST00000580986 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 ZSCAN29Q8IWY8 852 aaPredicted RBP12.37□□□□□ -0.43
CCDC47-203ENST00000580986 KCNB2Q92953 911 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 GLIS2Q9BZE0 524 aaPredicted RBP12.37□□□□□ -0.43
CCDC47-203ENST00000580986 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 RBM8AQ9Y5S9 174 aaKnown RBP12.37□□□□□ -0.43
CCDC47-203ENST00000580986 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
CCDC47-203ENST00000580986 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 ZNF213O14771 459 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 PLCD1P51178 756 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
CCDC47-203ENST00000580986 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms