RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 EXOC7Q9UPT5 735 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 CCDC61Q9Y6R9 512 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 LRRC9Q6ZRR7 1453 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PPFIA2O75334 1257 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 RANBP1P43487 201 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 ZNF131P52739 623 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 NBPF10Q6P3W6 841 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 RUFY3Q7L099 469 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 LRPPRCP42704 1394 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 KRT2P35908 639 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 TTC31Q49AM3 519 aaPredicted RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 HHATQ5VTY9 493 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 TSGA10Q9BZW7 698 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 Q9H521 79 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 GCC2Q8IWJ2 1684 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 TXNDC9O14530 226 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 SMTNP53814 917 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 CCDC122Q5T0U0 273 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 MCUR1Q96AQ8 359 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.68□□□□□ -1.5
NF1-219ENST00000579081 MIS12Q9H081 205 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 VPS18Q9P253 973 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 SYNJ1O43426 1573 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 FGD5Q6ZNL6 1462 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 OATP04181 439 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ZNF569Q5MCW4 686 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 AOPEPQ8N6M6 819 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 GJA3Q9Y6H8 435 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 AOX1Q06278 1338 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ZNF644Q9H582 1327 aaPredicted RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 AREL1O15033 823 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 KRT3P12035 628 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 GNA11P29992 359 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 KCNJ6P48051 423 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 VWA3BQ502W6 1294 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 CCDC62Q6P9F0 684 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 NOP9Q86U38 636 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 PDCD7Q8N8D1 485 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 WWC3Q9ULE0 1092 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 SYT1P21579 422 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 RPS6KA2Q15349 733 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 TEX2Q8IWB9 1127 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 CDAN1Q8IWY9 1227 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 FAM76AQ8TAV0 307 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ARHGEF2Q92974 986 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 NYXQ9GZU5 481 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 NUCKS1Q9H1E3 243 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 PICK1Q9NRD5 415 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 KARSQ15046 597 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 NOP56O00567 594 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 RIMBP2O15034 1052 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 HOXB6P17509 224 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 HACE1Q8IYU2 909 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ARHGAP45Q92619 1136 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 GINS2Q9Y248 185 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 CD2APQ9Y5K6 639 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ASXL1Q8IXJ9 1541 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 CARMIL3Q8ND23 1372 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ACTN4O43707 911 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 PSMA4P25789 261 aaKnown RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 MARCKSP29966 332 aaPredicted RBP5.68□□□□□ -1.5
NF1-219ENST00000579081 UBE3BQ7Z3V4 1068 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 ZKSCAN3Q9BRR0 538 aa5.68□□□□□ -1.5
NF1-219ENST00000579081 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 EIF3CLB5ME19 914 aaKnown RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 I3L4J1 428 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 STX17P56962 302 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 GIMAP6Q6P9H5 292 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 KRT28Q7Z3Y7 464 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 FAM129AQ9BZQ8 928 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 SPATS2LQ9NUQ6 558 aaKnown RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 TUBA8Q9NY65 449 aaPredicted RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 KIF11P52732 1056 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 ANO6Q4KMQ2 910 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 DTHD1Q6ZMT9 781 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 SV2BQ7L1I2 683 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 CHMP6Q96FZ7 201 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 DIABLOQ9NR28 239 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 ABCF3Q9NUQ8 709 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 RNF14Q9UBS8 474 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 DMRT2Q9Y5R5 561 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 RHOXF2BP0C7M4 288 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 FAM160A1Q05DH4 1040 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 CCDC186Q7Z3E2 898 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 VSIG1Q86XK7 387 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 RHOXF2Q9BQY4 288 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 MROH2BQ7Z745 1585 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 ADGBQ8N7X0 1667 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 ZSCAN22P10073 491 aaPredicted RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 IRX1P78414 480 aaPredicted RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 CASC4Q6P4E1 433 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 JARID2Q92833 1246 aaPredicted RBP5.67□□□□□ -1.5
NF1-219ENST00000579081 KIF9Q9HAQ2 790 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 TTLL3Q9Y4R7 772 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 CTTNBP2Q8WZ74 1663 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 PTPRCP08575 1304 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 DNM2P50570 870 aa5.67□□□□□ -1.5
NF1-219ENST00000579081 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms