RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 POTEFA5A3E0 1075 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 FAM196BA6NMK8 535 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 CTGFP29279 349 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 SLC9C1Q4G0N8 1177 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 TMED8Q6PL24 325 aaPredicted RBP27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 RPAP2Q8IXW5 612 aaPredicted RBP27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 TBC1D2Q9BYX2 928 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 ZBTB40Q9NUA8 1239 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 PI4KBQ9UBF8 816 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 KIAA0100Q14667 2235 aaKnown RBP27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 SIPA1L1O43166 1804 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 FOCADQ5VW36 1801 aa27.89■■■□□ 2.06
CDKN2A-212ENST00000578845 NBPF11Q86T75 865 aa27.88■■■□□ 2.05
CDKN2A-212ENST00000578845 METTL16Q86W50 562 aaKnown RBP27.88■■■□□ 2.05
CDKN2A-212ENST00000578845 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.88■■■□□ 2.05
CDKN2A-212ENST00000578845 FLT1P17948 1338 aa27.88■■■□□ 2.05
CDKN2A-212ENST00000578845 CDK5RAP2Q96SN8 1893 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 TRIM75PA6NK02 468 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 CYP2C8P10632 490 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 CAP2P40123 477 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 AACSQ86V21 672 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 RHPN1Q8TCX5 695 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 TRIM47Q96LD4 638 aa27.87■■■□□ 2.05
CDKN2A-212ENST00000578845 PSMC4P43686 418 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 RRP1BQ14684 758 aaKnown RBP27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 GADL1Q6ZQY3 521 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 CCDC84Q86UT8 332 aaPredicted RBP27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 CERS3Q8IU89 383 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 TGFBRAP1Q8WUH2 860 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 SRRDQ9UH36 339 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 RCAN3Q9UKA8 241 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 COG6Q9Y2V7 657 aa27.86■■■□□ 2.05
CDKN2A-212ENST00000578845 MAPKAPK5Q8IW41 473 aa27.85■■■□□ 2.05
CDKN2A-212ENST00000578845 SIRT2Q8IXJ6 389 aa27.85■■■□□ 2.05
CDKN2A-212ENST00000578845 AGTPBP1Q9UPW5 1226 aa27.85■■■□□ 2.05
CDKN2A-212ENST00000578845 ATAD5Q96QE3 1844 aa27.84■■■□□ 2.05
CDKN2A-212ENST00000578845 HMMRO75330 724 aa27.84■■■□□ 2.05
CDKN2A-212ENST00000578845 IDH1O75874 414 aaKnown RBP27.84■■■□□ 2.05
CDKN2A-212ENST00000578845 CYP7A1P22680 504 aa27.84■■■□□ 2.05
CDKN2A-212ENST00000578845 PROCA1Q8NCQ7 364 aaPredicted RBP27.84■■■□□ 2.05
CDKN2A-212ENST00000578845 DNAJC18Q9H819 358 aa27.84■■■□□ 2.05
CDKN2A-212ENST00000578845 LOC285556D6RIA3 1793 aa27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 HOXD10P28358 340 aa27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 PRPF38BQ5VTL8 546 aaKnown RBP27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 FOXP4Q8IVH2 680 aaPredicted RBP27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 ZNF280CQ8ND82 737 aa27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 KIF1BPQ96EK5 621 aa27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 CHMP4BQ9H444 224 aaKnown RBP27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 IL1RAPL2Q9NP60 686 aa27.83■■■□□ 2.05
CDKN2A-212ENST00000578845 OSBPP22059 807 aa27.82■■■□□ 2.04
CDKN2A-212ENST00000578845 DYNLL1P63167 89 aaKnown RBP27.82■■■□□ 2.04
CDKN2A-212ENST00000578845 TMEM106CQ9BVX2 250 aa27.82■■■□□ 2.04
CDKN2A-212ENST00000578845 ANTXR1Q9H6X2 564 aa27.82■■■□□ 2.04
CDKN2A-212ENST00000578845 NDUFB9Q9Y6M9 179 aa27.82■■■□□ 2.04
CDKN2A-212ENST00000578845 USP17L5A8MUK1 530 aa27.81■■■□□ 2.04
CDKN2A-212ENST00000578845 MAP3K12Q12852 859 aa27.81■■■□□ 2.04
CDKN2A-212ENST00000578845 SPP2Q13103 211 aa27.81■■■□□ 2.04
CDKN2A-212ENST00000578845 CLASRPQ8N2M8 674 aaKnown RBP27.81■■■□□ 2.04
CDKN2A-212ENST00000578845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.81■■■□□ 2.04
CDKN2A-212ENST00000578845 FMNL1O95466 1100 aaPredicted RBP27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 FCGRTP55899 365 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 SH3D19Q5HYK7 790 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 TREML2Q5T2D2 321 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 MAGEB6Q8N7X4 407 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 SH3TC2Q8TF17 1288 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 GINM1Q9NU53 330 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 PALD1Q9ULE6 856 aa27.8■■■□□ 2.04
CDKN2A-212ENST00000578845 MYPNQ86TC9 1320 aa27.79■■■□□ 2.04
CDKN2A-212ENST00000578845 ASNSP08243 561 aa27.79■■■□□ 2.04
CDKN2A-212ENST00000578845 WDR18Q9BV38 432 aa27.79■■■□□ 2.04
CDKN2A-212ENST00000578845 AS3MTQ9HBK9 375 aa27.79■■■□□ 2.04
CDKN2A-212ENST00000578845 PNMA3Q9UL41 463 aa27.79■■■□□ 2.04
CDKN2A-212ENST00000578845 RAB11FIP3O75154 756 aa27.78■■■□□ 2.04
CDKN2A-212ENST00000578845 EN2P19622 333 aaPredicted RBP27.78■■■□□ 2.04
CDKN2A-212ENST00000578845 PDE3AQ14432 1141 aa27.78■■■□□ 2.04
CDKN2A-212ENST00000578845 TTF1Q15361 905 aaPredicted RBP27.78■■■□□ 2.04
CDKN2A-212ENST00000578845 MIGA1Q8NAN2 632 aa27.78■■■□□ 2.04
CDKN2A-212ENST00000578845 SMCR8Q8TEV9 937 aaPredicted RBP27.78■■■□□ 2.04
CDKN2A-212ENST00000578845 HLA-DOAP06340 250 aa27.77■■■□□ 2.04
CDKN2A-212ENST00000578845 MGAMO43451 1857 aa27.76■■■□□ 2.04
CDKN2A-212ENST00000578845 ECM2O94769 699 aaPredicted RBP27.76■■■□□ 2.03
CDKN2A-212ENST00000578845 HMGCS2P54868 508 aa27.76■■■□□ 2.03
CDKN2A-212ENST00000578845 JAG1P78504 1218 aa27.76■■■□□ 2.03
CDKN2A-212ENST00000578845 CRACR2BQ8N4Y2 399 aaPredicted RBP27.76■■■□□ 2.03
CDKN2A-212ENST00000578845 RAET1EQ8TD07 263 aa27.76■■■□□ 2.03
CDKN2A-212ENST00000578845 SAP30BPQ9UHR5 308 aaKnown RBP27.76■■■□□ 2.03
CDKN2A-212ENST00000578845 GRK4P32298 578 aa27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 PRKCZQ05513 592 aa27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 PABPC4Q13310 644 aaKnown RBP eCLIP27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 FAM110CQ1W6H9 321 aa27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 RIOK1Q9BRS2 568 aaKnown RBP27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 TRIM34Q9BYJ4 488 aa27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 EHD4Q9H223 541 aa27.75■■■□□ 2.03
CDKN2A-212ENST00000578845 IFIT2P09913 472 aaKnown RBP27.74■■■□□ 2.03
CDKN2A-212ENST00000578845 BACE1P56817 501 aa27.74■■■□□ 2.03
CDKN2A-212ENST00000578845 SLC4A8Q2Y0W8 1093 aa27.74■■■□□ 2.03
CDKN2A-212ENST00000578845 DDX60LQ5H9U9 1706 aaKnown RBP27.73■■■□□ 2.03
CDKN2A-212ENST00000578845 USP5P45974 858 aa27.73■■■□□ 2.03
CDKN2A-212ENST00000578845 C20orf194Q5TEA3 1177 aa27.73■■■□□ 2.03
CDKN2A-212ENST00000578845 ZBTB21Q9ULJ3 1066 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms