RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	ZCCHC17	Q9NP64	241 aa	Known RBP	13.27	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PAG1	Q9NWQ8	432 aa		13.27	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PI4KB	Q9UBF8	816 aa		13.27	□□□□□ -0.29
PPP4R1-208	ENST00000578178	HERC5	Q9UII4	1024 aa	Known RBP	13.27	□□□□□ -0.29
PPP4R1-208	ENST00000578178	SLC9C2	Q5TAH2	1124 aa		13.26	□□□□□ -0.29
PPP4R1-208	ENST00000578178	EDC3	Q96F86	508 aa	Known RBP	13.26	□□□□□ -0.29
PPP4R1-208	ENST00000578178	HAUS7	Q99871	368 aa		13.26	□□□□□ -0.29
PPP4R1-208	ENST00000578178	BTBD19	C9JJ37	291 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CXCL11	O14625	94 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	HLA-DOA	P06340	250 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PTPRA	P18433	802 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	USP5	P45974	858 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	GPATCH3	Q96I76	525 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	RIOK1	Q9BRS2	568 aa	Known RBP	13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ZFYVE28	Q9HCC9	887 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ECHDC1	Q9NTX5	307 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ZHX2	Q9Y6X8	837 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	LOC285556	D6RIA3	1793 aa		13.25	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ZNF532	Q9HCE3	1301 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	MAGEB6P1	A0A0J9YX57	407 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TCRBV5S4A2T	A0A5A2	114 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PKN2	Q16513	984 aa	Known RBP	13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ANKRD23	Q86SG2	305 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ERO1A	Q96HE7	468 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.24	□□□□□ -0.29	1e-7	■■□□□ 12.7
PPP4R1-208	ENST00000578178	DNAJC18	Q9H819	358 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	SAP30BP	Q9UHR5	308 aa	Known RBP	13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PALD1	Q9ULE6	856 aa		13.24	□□□□□ -0.29
PPP4R1-208	ENST00000578178		A0A0G2JLL6	359 aa	Predicted RBP	13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ADD2	P35612	726 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CAP2	P40123	477 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	AAMP	Q13685	434 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	MOGS	Q13724	837 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	METTL16	Q86W50	562 aa	Known RBP	13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TRIM34	Q9BYJ4	488 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TBC1D2	Q9BYX2	928 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	AFG3L2	Q9Y4W6	797 aa		13.23	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TLR2	O60603	784 aa		13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	SP3	Q02447	781 aa		13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	RRP1B	Q14684	758 aa	Known RBP	13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	SLC4A8	Q2Y0W8	1093 aa		13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CCDC84	Q86UT8	332 aa	Predicted RBP	13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	LCORL	Q8N3X6	602 aa		13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CD99L2	Q8TCZ2	262 aa		13.22	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TRIM75P	A6NK02	468 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	CCDC85C	A6NKD9	419 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PDHX	O00330	501 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ASNS	P08243	561 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	KCNA4	P22459	653 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	HDAC1	Q13547	482 aa	Predicted RBP	13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TSHZ3	Q63HK5	1081 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	FASTKD5	Q7L8L6	764 aa	Known RBP	13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	PARK7	Q99497	189 aa	Known RBP	13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	EHD4	Q9H223	541 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	TRIM17	Q9Y577	477 aa		13.21	□□□□□ -0.29
PPP4R1-208	ENST00000578178	ZSWIM8	A7E2V4	1837 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	TTC41P	Q6P2S7	1318 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ADGRA2	Q96PE1	1338 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	MYH8	P13535	1937 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	USP17L5	A8MUK1	530 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	MBD4	O95243	580 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	UBE3C	Q15386	1083 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ZSCAN25	Q6NSZ9	544 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	GPAT2	Q6NUI2	795 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	GADL1	Q6ZQY3	521 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	OTOP1	Q7RTM1	612 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	TTC6	Q86TZ1	520 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ZNF280C	Q8ND82	737 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	SDR42E1	Q8WUS8	393 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	GCC1	Q96CN9	775 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ARMT1	Q9H993	441 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	AS3MT	Q9HBK9	375 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	GINM1	Q9NU53	330 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	SERPINB13	Q9UIV8	391 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ZBTB21	Q9ULJ3	1066 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	HPS5	Q9UPZ3	1129 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	SLC45A1	Q9Y2W3	748 aa		13.2	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ERC2	O15083	957 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	GDF11	O95390	407 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	CHGB	P05060	677 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	SLFNL1	Q499Z3	407 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	KBTBD3	Q8NAB2	608 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	EFCC1	Q9HA90	598 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	AGTPBP1	Q9UPW5	1226 aa		13.19	□□□□□ -0.3
PPP4R1-208	ENST00000578178	GLRX3	O76003	335 aa	Known RBP	13.18	□□□□□ -0.3
PPP4R1-208	ENST00000578178	POLR3D	P05423	398 aa	Predicted RBP	13.18	□□□□□ -0.3
PPP4R1-208	ENST00000578178	MX1	P20591	662 aa		13.18	□□□□□ -0.3
PPP4R1-208	ENST00000578178	SPP2	Q13103	211 aa		13.18	□□□□□ -0.3
PPP4R1-208	ENST00000578178	ARHGEF6	Q15052	776 aa		13.18	□□□□□ -0.3
PPP4R1-208	ENST00000578178	TATDN1	Q6P1N9	297 aa		13.18	□□□□□ -0.3
PPP4R1-208	ENST00000578178	C17orf99	Q6UX52	265 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms