RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	CCDC146	Q8IYE0	955 aa		11.78	□□□□□ -0.52
TOM1L1-223	ENST00000576932	DZIP1L	Q8IYY4	767 aa	Known RBP	11.78	□□□□□ -0.52
TOM1L1-223	ENST00000576932	TMEM39B	Q9GZU3	492 aa		11.78	□□□□□ -0.52
TOM1L1-223	ENST00000576932	TDRD3	Q9H7E2	651 aa	Known RBP	11.78	□□□□□ -0.52
TOM1L1-223	ENST00000576932	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.78	□□□□□ -0.52
TOM1L1-223	ENST00000576932		A0A1B0GUL6	1792 aa		11.77	□□□□□ -0.52
TOM1L1-223	ENST00000576932	ANKRD18B	A2A2Z9	1011 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	HR	O43593	1189 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FMNL1	O95466	1100 aa	Predicted RBP	11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	CASP7	P55210	303 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	CWF19L2	Q2TBE0	894 aa	Known RBP	11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	LRIT3	Q3SXY7	679 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MFSD14B	Q5SR56	506 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	NLRP7	Q8WX94	980 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	GDF15	Q99988	308 aa		11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TTF2	Q9UNY4	1162 aa	Known RBP	11.77	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TCP10L2	B9ZVM9	353 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	SNAP23	O00161	211 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ELL2	O00472	640 aa	Predicted RBP	11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FCGRT	P55899	365 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	HDLBP	Q00341	1268 aa	Known RBP	11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	GCKR	Q14397	625 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FKBP1C	Q5VVH2	108 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FAM83A	Q86UY5	434 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	DEFB123	Q8N688	67 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TDRD7	Q8NHU6	1098 aa	Known RBP	11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	WRNIP1	Q96S55	665 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FAM117A	Q9C073	453 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	BIN2	Q9UBW5	565 aa	Predicted RBP	11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	STAP2	Q9UGK3	403 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	CPA4	Q9UI42	421 aa		11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.76	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PDHX	O00330	501 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TAF5L	O75529	589 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MS4A1	P11836	297 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	CRK	P46108	304 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PRKCZ	Q05513	592 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	DCAF15	Q66K64	600 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	C8orf58	Q8NAV2	365 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	REPIN1	Q9BWE0	567 aa	Known RBP	11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	UNC93B1	Q9H1C4	597 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MYH16	Q9H6N6	1097 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	GOPC	Q9HD26	462 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	KCNH4	Q9UQ05	1017 aa		11.75	□□□□□ -0.53
TOM1L1-223	ENST00000576932	BCR	P11274	1271 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	USP46	P62068	366 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	IFIT5	Q13325	482 aa	Known RBP	11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	IRF5	Q13568	498 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	WDR43	Q15061	677 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	KMT5B	Q4FZB7	885 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	WNT2B	Q93097	391 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PARK7	Q99497	189 aa	Known RBP	11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MRI	Q9BWK5	157 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	STK31	Q9BXU1	1019 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PAK6	Q9NQU5	681 aa	Predicted RBP	11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MTMR10	Q9NXD2	777 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	JAG2	Q9Y219	1238 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	VCAN	P13611	3396 aa		11.74	□□□□□ -0.53
TOM1L1-223	ENST00000576932	C3orf80	F5H4A9	247 aa		11.73	□□□□□ -0.53
TOM1L1-223	ENST00000576932	CD46	P15529	392 aa		11.73	□□□□□ -0.53
TOM1L1-223	ENST00000576932	NECAB2	Q7Z6G3	386 aa		11.73	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ANKLE1	Q8NAG6	615 aa		11.73	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ZNF341	Q9BYN7	854 aa		11.73	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TMOD2	Q9NZR1	351 aa		11.73	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MGAM	O43451	1857 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ADCY3	O60266	1144 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TFRC	P02786	760 aa	Known RBP	11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	HIBADH	P31937	336 aa	Known RBP	11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MOGS	Q13724	837 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	UBE4A	Q14139	1066 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	LINS1	Q8NG48	757 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TBC1D22A	Q8WUA7	517 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TEKT1	Q969V4	418 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ZDHHC15	Q96MV8	337 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ZNF112	Q9UJU3	913 aa		11.72	□□□□□ -0.53
TOM1L1-223	ENST00000576932	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ALPK3	Q96L96	1907 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	CXCL11	O14625	94 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	INHA	P05111	366 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	NOL9	Q5SY16	702 aa	Known RBP	11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	LDHAL6A	Q6ZMR3	332 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	TDH	Q8IZJ6	230 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	PAWR	Q96IZ0	340 aa	Known RBP	11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FAM84B	Q96KN1	310 aa	Predicted RBP	11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	DEFB118	Q96PH6	123 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	GABRQ	Q9UN88	632 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	ADAMTS8	Q9UP79	889 aa		11.71	□□□□□ -0.53
TOM1L1-223	ENST00000576932	FLT3LG	P49771	235 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	BCAM	P50895	628 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	PPP4C	P60510	307 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	FOXO4	P98177	505 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932		Q7L0L9	218 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	KRTAP3-3	Q9BYR6	98 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	KRTAP3-2	Q9BYR7	98 aa		11.7	□□□□□ -0.54
TOM1L1-223	ENST00000576932	SLC45A1	Q9Y2W3	748 aa		11.7	□□□□□ -0.54

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