RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 SLC12A7Q9Y666 1083 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 CCDC69A6NI79 296 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 SMIM22K7EJ46 135 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 CDKL5O76039 1030 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 SEC23AQ15436 765 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 PLCG2P16885 1265 aa33.24■■■□□ 2.91
CTDNEP1-210ENST00000574322 FSD2A1L4K1 749 aa33.23■■■□□ 2.91
CTDNEP1-210ENST00000574322 GTF2IP78347 998 aa33.23■■■□□ 2.91
CTDNEP1-210ENST00000574322 FERMT3Q86UX7 667 aa33.23■■■□□ 2.91
CTDNEP1-210ENST00000574322 UBAC1Q9BSL1 405 aa33.23■■■□□ 2.91
CTDNEP1-210ENST00000574322 GDPD2Q9HCC8 539 aa33.23■■■□□ 2.91
CTDNEP1-210ENST00000574322 ROBO3Q96MS0 1386 aa33.23■■■□□ 2.91
CTDNEP1-210ENST00000574322 KRT85P78386 507 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 C12orf60Q5U649 245 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 CPLX2Q6PUV4 134 aaKnown RBP33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 SYNE3Q6ZMZ3 975 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 FAM217BQ9NTX9 383 aaPredicted RBP33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 ARFGEF1Q9Y6D6 1849 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 CDK5RAP2Q96SN8 1893 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 USP5P45974 858 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 MCM9Q9NXL9 1143 aa33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 ORC3Q9UBD5 711 aaPredicted RBP33.22■■■□□ 2.91
CTDNEP1-210ENST00000574322 SNED1Q8TER0 1413 aa33.21■■■□□ 2.91
CTDNEP1-210ENST00000574322 NCLP19338 710 aaKnown RBP33.21■■■□□ 2.91
CTDNEP1-210ENST00000574322 BTDP43251 543 aa33.21■■■□□ 2.91
CTDNEP1-210ENST00000574322 NTRK3Q16288 839 aa33.21■■■□□ 2.91
CTDNEP1-210ENST00000574322 PODNQ7Z5L7 613 aa33.21■■■□□ 2.91
CTDNEP1-210ENST00000574322 NAV1Q8NEY1 1877 aa33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 GOLGA8AA7E2F4 631 aa33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 CDC27P30260 824 aa33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 ADD1P35611 737 aaKnown RBP33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 ARHGAP27Q6ZUM4 889 aa33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 MICU3Q86XE3 530 aa33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 ZSCAN10Q96SZ4 725 aaPredicted RBP33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 ELP1O95163 1332 aa33.2■■■□□ 2.91
CTDNEP1-210ENST00000574322 UBE2HP62256 183 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 PDE4BQ07343 736 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 RAB11FIP4Q86YS3 637 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 STK11IPQ8N1F8 1099 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 ZKSCAN3Q9BRR0 538 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 TNKSO95271 1327 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 PPP2R5BQ15173 497 aa33.19■■■□□ 2.9
CTDNEP1-210ENST00000574322 GADD45BO75293 160 aaPredicted RBP33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 USP17L8P0C7I0 530 aa33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 RHBDL3P58872 404 aa33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 CAVIN1Q6NZI2 390 aaKnown RBP33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 IQCA1Q86XH1 822 aa33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 PSMD1Q99460 953 aa33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 SCAND2PQ9GZW5 306 aaPredicted RBP33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 TAOK3Q9H2K8 898 aa33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 DDX60LQ5H9U9 1706 aaKnown RBP33.18■■■□□ 2.9
CTDNEP1-210ENST00000574322 FIBPO43427 364 aa33.17■■■□□ 2.9
CTDNEP1-210ENST00000574322 GRIN3BO60391 1043 aa33.17■■■□□ 2.9
CTDNEP1-210ENST00000574322 CYP2D6P10635 497 aa33.17■■■□□ 2.9
CTDNEP1-210ENST00000574322 STK36Q9NRP7 1315 aa33.17■■■□□ 2.9
CTDNEP1-210ENST00000574322 NFKBIEO00221 500 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 RANBP6O60518 1105 aaKnown RBP33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 CERS5Q8N5B7 392 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 ENAHQ8N8S7 591 aaPredicted RBP33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 FBXO18Q8NFZ0 1043 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 MYH15Q9Y2K3 1946 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 ZNF445P59923 1031 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 FKBP1AP62942 108 aaKnown RBP33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 ATL3Q6DD88 541 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 AMOTL1Q8IY63 956 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 ZNF654Q8IZM8 581 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 SUPT20HQ8NEM7 779 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 TGFBRAP1Q8WUH2 860 aa33.16■■■□□ 2.9
CTDNEP1-210ENST00000574322 UTRNP46939 3433 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 FOCADQ5VW36 1801 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 CCDC196A0A1B0GTZ2 297 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 DCAF8L1A6NGE4 600 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 IFNAR1P17181 557 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 EVX2Q03828 476 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 DOK7Q18PE1 504 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 C8orf76Q96K31 380 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 DAGLAQ9Y4D2 1042 aa33.15■■■□□ 2.9
CTDNEP1-210ENST00000574322 GOLGA6L3A6NEY3 463 aa33.14■■■□□ 2.9
CTDNEP1-210ENST00000574322 PRDM1O75626 825 aa33.14■■■□□ 2.9
CTDNEP1-210ENST00000574322 RXRAP19793 462 aa33.14■■■□□ 2.9
CTDNEP1-210ENST00000574322 FAM173BQ6P4H8 233 aa33.14■■■□□ 2.9
CTDNEP1-210ENST00000574322 MYL10Q9BUA6 226 aa33.14■■■□□ 2.9
CTDNEP1-210ENST00000574322 RASSF7Q02833 373 aa33.14■■■□□ 2.89
CTDNEP1-210ENST00000574322 RTN1Q16799 776 aa33.13■■■□□ 2.89
CTDNEP1-210ENST00000574322 ZSCAN23Q3MJ62 389 aa33.13■■■□□ 2.89
CTDNEP1-210ENST00000574322 L1TD1Q5T7N2 865 aaKnown RBP33.13■■■□□ 2.89
CTDNEP1-210ENST00000574322 TEX11Q8IYF3 940 aa33.13■■■□□ 2.89
CTDNEP1-210ENST00000574322 TMEM63CQ9P1W3 806 aa33.13■■■□□ 2.89
CTDNEP1-210ENST00000574322 LTBP3Q9NS15 1303 aa33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 G3V3G9 751 aa33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 IARSP41252 1262 aaKnown RBP33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 DCAF8Q5TAQ9 597 aa33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 TTC6Q86TZ1 520 aa33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 FANCBQ8NB91 859 aa33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 ZNF277Q9NRM2 450 aaPredicted RBP33.12■■■□□ 2.89
CTDNEP1-210ENST00000574322 PPFIA3O75145 1194 aa33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 MRIQ9BWK5 157 aa33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 CFAP45Q9UL16 551 aa33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 FER1L6Q2WGJ9 1857 aa33.11■■■□□ 2.89
CTDNEP1-210ENST00000574322 FMNL1O95466 1100 aaPredicted RBP33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms