RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 GPR108Q9NPR9 543 aa19.14■□□□□ 0.65
LITAF-209ENST00000571688 TOMM22Q9NS69 142 aa19.14■□□□□ 0.65
LITAF-209ENST00000571688 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.65
LITAF-209ENST00000571688 MFAP3LO75121 409 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 ZNF827Q17R98 1081 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 SWT1Q5T5J6 900 aaKnown RBP19.13■□□□□ 0.65
LITAF-209ENST00000571688 PPFIBP1Q86W92 1011 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 IGSF22Q8N9C0 903 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
LITAF-209ENST00000571688 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
LITAF-209ENST00000571688 PAXIP1Q6ZW49 1069 aaPredicted RBP19.13■□□□□ 0.65
LITAF-209ENST00000571688 KRI1Q8N9T8 703 aaKnown RBP19.13■□□□□ 0.65
LITAF-209ENST00000571688 CDC5LQ99459 802 aaKnown RBP19.13■□□□□ 0.65
LITAF-209ENST00000571688 PLCD1P51178 756 aa19.12■□□□□ 0.65
LITAF-209ENST00000571688 EIF5P55010 431 aaKnown RBP19.12■□□□□ 0.65
LITAF-209ENST00000571688 AMPD2Q01433 879 aa19.12■□□□□ 0.65
LITAF-209ENST00000571688 ATG9AQ7Z3C6 839 aa19.12■□□□□ 0.65
LITAF-209ENST00000571688 MYO1AQ9UBC5 1043 aa19.12■□□□□ 0.65
LITAF-209ENST00000571688 ERCC5P28715 1186 aaPredicted RBP19.12■□□□□ 0.65
LITAF-209ENST00000571688 MYH8P13535 1937 aa19.12■□□□□ 0.65
LITAF-209ENST00000571688 FGAP02671 866 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 IFIT1P09914 478 aaKnown RBP19.11■□□□□ 0.65
LITAF-209ENST00000571688 TIMM10P62072 90 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 ZC3H4Q9UPT8 1303 aaKnown RBP19.11■□□□□ 0.65
LITAF-209ENST00000571688 CASP7P55210 303 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 SPECC1Q5M775 1068 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 MCTP2Q6DN12 878 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 RALYLQ86SE5 291 aaKnown RBP19.11■□□□□ 0.65
LITAF-209ENST00000571688 FAM107BQ9H098 131 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 SERTAD1Q9UHV2 236 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 ARFGEF2Q9Y6D5 1785 aa19.11■□□□□ 0.65
LITAF-209ENST00000571688 LMTK3Q96Q04 1460 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 CDKL5O76039 1030 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 STK11IPQ8N1F8 1099 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 ACRBPQ8NEB7 543 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 CPLX3Q8WVH0 158 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 CCDC51Q96ER9 411 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
LITAF-209ENST00000571688 ADD3Q9UEY8 706 aaKnown RBP19.1■□□□□ 0.65
LITAF-209ENST00000571688 SLIT3O75094 1523 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 SHOX2O60902 331 aaPredicted RBP19.1■□□□□ 0.65
LITAF-209ENST00000571688 ABL1P00519 1130 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 ARHGAP25P42331 645 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 LRP10Q7Z4F1 713 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 SPATA20Q8TB22 786 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 HPCAL4Q9UM19 191 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 MYO6Q9UM54 1294 aa19.1■□□□□ 0.65
LITAF-209ENST00000571688 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
LITAF-209ENST00000571688 LMBR1LQ6UX01 489 aa19.09■□□□□ 0.65
LITAF-209ENST00000571688 CNGA4Q8IV77 575 aa19.09■□□□□ 0.65
LITAF-209ENST00000571688 CEP89Q96ST8 783 aa19.09■□□□□ 0.65
LITAF-209ENST00000571688 CDHR2Q9BYE9 1310 aa19.09■□□□□ 0.65
LITAF-209ENST00000571688 POLR2DO15514 142 aaKnown RBP19.09■□□□□ 0.65
LITAF-209ENST00000571688 METAP2P50579 478 aaKnown RBP eCLIP19.09■□□□□ 0.65
LITAF-209ENST00000571688 WWC3Q9ULE0 1092 aa19.09■□□□□ 0.65
LITAF-209ENST00000571688 TMEM94Q12767 1356 aa19.09■□□□□ 0.65
LITAF-209ENST00000571688 CASP14P31944 242 aa19.08■□□□□ 0.65
LITAF-209ENST00000571688 USP14P54578 494 aa19.08■□□□□ 0.65
LITAF-209ENST00000571688 NCAPH2Q6IBW4 605 aa19.08■□□□□ 0.65
LITAF-209ENST00000571688 MICALL1Q8N3F8 863 aa19.08■□□□□ 0.65
LITAF-209ENST00000571688 CCDC148Q8NFR7 591 aa19.08■□□□□ 0.65
LITAF-209ENST00000571688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.08■□□□□ 0.65
LITAF-209ENST00000571688 A0A087WZG4 1122 aa19.08■□□□□ 0.64
LITAF-209ENST00000571688 GYPCP04921 128 aa19.08■□□□□ 0.64
LITAF-209ENST00000571688 MMP14P50281 582 aa19.08■□□□□ 0.64
LITAF-209ENST00000571688 CT47A1Q5JQC4 288 aaPredicted RBP19.08■□□□□ 0.64
LITAF-209ENST00000571688 GRAMD1CQ8IYS0 662 aa19.08■□□□□ 0.64
LITAF-209ENST00000571688 FBXO2Q9UK22 296 aaPredicted RBP19.08■□□□□ 0.64
LITAF-209ENST00000571688 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.64
LITAF-209ENST00000571688 MYO5AQ9Y4I1 1855 aaKnown RBP19.08■□□□□ 0.64
LITAF-209ENST00000571688 PTPREP23469 700 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 GRIN1Q05586 938 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 TRDNQ13061 729 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 SPATA1Q5VX52 437 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 ITIH6Q6UXX5 1313 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 PHKBQ93100 1093 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 SEC31BQ9NQW1 1179 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 ANGEL1Q9UNK9 670 aaKnown RBP19.07■□□□□ 0.64
LITAF-209ENST00000571688 ACTN4O43707 911 aaKnown RBP19.07■□□□□ 0.64
LITAF-209ENST00000571688 MCM3P25205 808 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 FXR1P51114 621 aaKnown RBP eCLIP19.07■□□□□ 0.64
LITAF-209ENST00000571688 ERVK-24P63145 666 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 MAP9Q49MG5 647 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 CDKAL1Q5VV42 579 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 ZNF790Q6PG37 636 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 TMTC1Q8IUR5 882 aa19.07■□□□□ 0.64
LITAF-209ENST00000571688 EXOC5O00471 708 aa19.06■□□□□ 0.64
LITAF-209ENST00000571688 COG1Q8WTW3 980 aa19.06■□□□□ 0.64
LITAF-209ENST00000571688 SMARCC1Q92922 1105 aaPredicted RBP19.06■□□□□ 0.64
LITAF-209ENST00000571688 CTAGE1Q96RT6 745 aa19.06■□□□□ 0.64
LITAF-209ENST00000571688 ZNF213O14771 459 aa19.06■□□□□ 0.64
LITAF-209ENST00000571688 IL15P40933 162 aaPredicted RBP19.06■□□□□ 0.64
LITAF-209ENST00000571688 GSCP56915 257 aaPredicted RBP19.06■□□□□ 0.64
LITAF-209ENST00000571688 FOXO4P98177 505 aa19.06■□□□□ 0.64
LITAF-209ENST00000571688 TRIM29Q14134 588 aa19.06■□□□□ 0.64
LITAF-209ENST00000571688 E2F4Q16254 413 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms