RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 PLCG2P16885 1265 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 PSMC4P43686 418 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 PPP4CP60510 307 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 RRP1BQ14684 758 aaKnown RBP25.27■■□□□ 1.64
LITAF-205ENST00000570904 AACSQ86V21 672 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 ERC1Q8IUD2 1116 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 TRIM47Q96LD4 638 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 COG6Q9Y2V7 657 aa25.27■■□□□ 1.64
LITAF-205ENST00000570904 BCRP11274 1271 aa25.26■■□□□ 1.63
LITAF-205ENST00000570904 SH3TC2Q8TF17 1288 aa25.26■■□□□ 1.63
LITAF-205ENST00000570904 IL1RAPL2Q9NP60 686 aa25.26■■□□□ 1.63
LITAF-205ENST00000570904 FLT1P17948 1338 aa25.26■■□□□ 1.63
LITAF-205ENST00000570904 PTPRFP10586 1907 aa25.25■■□□□ 1.63
LITAF-205ENST00000570904 IDH1O75874 414 aaKnown RBP25.25■■□□□ 1.63
LITAF-205ENST00000570904 MYCP01106 439 aaPredicted RBP25.25■■□□□ 1.63
LITAF-205ENST00000570904 GNRH1P01148 92 aa25.25■■□□□ 1.63
LITAF-205ENST00000570904 CYP7A1P22680 504 aa25.25■■□□□ 1.63
LITAF-205ENST00000570904 DYNLL1P63167 89 aaKnown RBP25.25■■□□□ 1.63
LITAF-205ENST00000570904 NBPF11Q86T75 865 aa25.25■■□□□ 1.63
LITAF-205ENST00000570904 SIPA1L1O43166 1804 aa25.24■■□□□ 1.63
LITAF-205ENST00000570904 RBBP6Q7Z6E9 1792 aaKnown RBP25.24■■□□□ 1.63
LITAF-205ENST00000570904 FMNL1O95466 1100 aaPredicted RBP25.24■■□□□ 1.63
LITAF-205ENST00000570904 EN2P19622 333 aaPredicted RBP25.24■■□□□ 1.63
LITAF-205ENST00000570904 OSBPP22059 807 aa25.24■■□□□ 1.63
LITAF-205ENST00000570904 CAP2P40123 477 aa25.24■■□□□ 1.63
LITAF-205ENST00000570904 ANTXR1Q9H6X2 564 aa25.24■■□□□ 1.63
LITAF-205ENST00000570904 HERC5Q9UII4 1024 aaKnown RBP25.24■■□□□ 1.63
LITAF-205ENST00000570904 APBB1O00213 710 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 PRMT2P55345 433 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 RHPN1Q8TCX5 695 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 TMEM106CQ9BVX2 250 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 DHX36Q9H2U1 1008 aaKnown RBP25.23■■□□□ 1.63
LITAF-205ENST00000570904 PI4KBQ9UBF8 816 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 SRRDQ9UH36 339 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 DDX19BQ9UMR2 479 aa25.23■■□□□ 1.63
LITAF-205ENST00000570904 CDK5RAP2Q96SN8 1893 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 IGSF3O75054 1194 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 SPP2Q13103 211 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 HSP90AB4PQ58FF6 505 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 TREML2Q5T2D2 321 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 PRPF38BQ5VTL8 546 aaKnown RBP25.22■■□□□ 1.63
LITAF-205ENST00000570904 MAGEB6Q8N7X4 407 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 MIGA1Q8NAN2 632 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 DNAJC18Q9H819 358 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 ZBTB40Q9NUA8 1239 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 SAP30BPQ9UHR5 308 aaKnown RBP25.22■■□□□ 1.63
LITAF-205ENST00000570904 RCAN3Q9UKA8 241 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 AGTPBP1Q9UPW5 1226 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 SLC45A1Q9Y2W3 748 aa25.22■■□□□ 1.63
LITAF-205ENST00000570904 SLC4A8Q2Y0W8 1093 aa25.21■■□□□ 1.63
LITAF-205ENST00000570904 SIRT2Q8IXJ6 389 aa25.21■■□□□ 1.63
LITAF-205ENST00000570904 ZNF280CQ8ND82 737 aa25.21■■□□□ 1.63
LITAF-205ENST00000570904 PALD1Q9ULE6 856 aa25.21■■□□□ 1.63
LITAF-205ENST00000570904 ATAD5Q96QE3 1844 aa25.21■■□□□ 1.63
LITAF-205ENST00000570904 MYPNQ86TC9 1320 aa25.2■■□□□ 1.62
LITAF-205ENST00000570904 HOXD10P28358 340 aa25.2■■□□□ 1.62
LITAF-205ENST00000570904 RPAP2Q8IXW5 612 aaPredicted RBP25.2■■□□□ 1.62
LITAF-205ENST00000570904 SMCR8Q8TEV9 937 aaPredicted RBP25.2■■□□□ 1.62
LITAF-205ENST00000570904 FOCADQ5VW36 1801 aa25.2■■□□□ 1.62
LITAF-205ENST00000570904 USP17L5A8MUK1 530 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 HMMRO75330 724 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 HMGCS2P54868 508 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 FCGRTP55899 365 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 CRACR2BQ8N4Y2 399 aaPredicted RBP25.19■■□□□ 1.62
LITAF-205ENST00000570904 RAET1EQ8TD07 263 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 TRIM34Q9BYJ4 488 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 BCL11AQ9H165 835 aa25.19■■□□□ 1.62
LITAF-205ENST00000570904 JAG1P78504 1218 aa25.18■■□□□ 1.62
LITAF-205ENST00000570904 PRKCZQ05513 592 aa25.18■■□□□ 1.62
LITAF-205ENST00000570904 MAP3K12Q12852 859 aa25.18■■□□□ 1.62
LITAF-205ENST00000570904 SHROOM1Q2M3G4 852 aaPredicted RBP25.18■■□□□ 1.62
LITAF-205ENST00000570904 PROCA1Q8NCQ7 364 aaPredicted RBP25.18■■□□□ 1.62
LITAF-205ENST00000570904 KIF1BPQ96EK5 621 aa25.18■■□□□ 1.62
LITAF-205ENST00000570904 TBC1D2Q9BYX2 928 aa25.18■■□□□ 1.62
LITAF-205ENST00000570904 GDF11O95390 407 aa25.17■■□□□ 1.62
LITAF-205ENST00000570904 METTL16Q86W50 562 aaKnown RBP25.17■■□□□ 1.62
LITAF-205ENST00000570904 CLASRPQ8N2M8 674 aaKnown RBP25.17■■□□□ 1.62
LITAF-205ENST00000570904 LOC285556D6RIA3 1793 aa25.17■■□□□ 1.62
LITAF-205ENST00000570904 HLA-DOAP06340 250 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 GRK4P32298 578 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 USP5P45974 858 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 MTFR1Q15390 333 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 C20orf194Q5TEA3 1177 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 FOXP4Q8IVH2 680 aaPredicted RBP25.16■■□□□ 1.62
LITAF-205ENST00000570904 AS3MTQ9HBK9 375 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 PNMA3Q9UL41 463 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 GABRQQ9UN88 632 aa25.16■■□□□ 1.62
LITAF-205ENST00000570904 ANKRD13CQ8N6S4 541 aa25.15■■□□□ 1.62
LITAF-205ENST00000570904 ASNSP08243 561 aa25.14■■□□□ 1.62
LITAF-205ENST00000570904 IFIT2P09913 472 aaKnown RBP25.14■■□□□ 1.62
LITAF-205ENST00000570904 MTMR2Q13614 643 aa25.14■■□□□ 1.62
LITAF-205ENST00000570904 SH3D19Q5HYK7 790 aa25.14■■□□□ 1.62
LITAF-205ENST00000570904 CERS3Q8IU89 383 aa25.14■■□□□ 1.62
LITAF-205ENST00000570904 DNAJC2Q99543 621 aaKnown RBP25.14■■□□□ 1.62
LITAF-205ENST00000570904 MGAMO43451 1857 aa25.14■■□□□ 1.61
LITAF-205ENST00000570904 WDR18Q9BV38 432 aa25.13■■□□□ 1.61
LITAF-205ENST00000570904 ZBTB21Q9ULJ3 1066 aa25.13■■□□□ 1.61
LITAF-205ENST00000570904 TNPO2O14787 897 aaKnown RBP25.12■■□□□ 1.61
LITAF-205ENST00000570904 PABPC4Q13310 644 aaKnown RBP eCLIP25.12■■□□□ 1.61
LITAF-205ENST00000570904 TTF1Q15361 905 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms