RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
SMG1-216ENST00000569122 ASCC2Q9H1I8 757 aaPredicted RBP10.83□□□□□ -0.68
SMG1-216ENST00000569122 UTYO14607 1347 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 USP17L5A8MUK1 530 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 ZBTB22O15209 634 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 NPM3O75607 178 aaKnown RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 FOSL2P15408 326 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 PRDX5P30044 214 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 CACNB2Q08289 660 aaPredicted RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 DDX10Q13206 875 aaKnown RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 SH3D19Q5HYK7 790 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 MFSD14CQ5VZR4 134 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 SPTY2D1Q68D10 685 aaPredicted RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 LHX8Q68G74 356 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 SENP6Q9GZR1 1112 aaPredicted RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 BICC1Q9H694 974 aaKnown RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMG1-216ENST00000569122 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
SMG1-216ENST00000569122 TMOD4Q9NZQ9 345 aa10.82□□□□□ -0.68
SMG1-216ENST00000569122 HOXA7P31268 230 aaPredicted RBP10.81□□□□□ -0.68
SMG1-216ENST00000569122 HMGCS2P54868 508 aa10.81□□□□□ -0.68
SMG1-216ENST00000569122 DZIP1Q86YF9 867 aaKnown RBP10.81□□□□□ -0.68
SMG1-216ENST00000569122 KAZALD1Q96I82 304 aa10.81□□□□□ -0.68
SMG1-216ENST00000569122 PRKRIP1Q9H875 184 aaPredicted RBP10.81□□□□□ -0.68
SMG1-216ENST00000569122 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
SMG1-216ENST00000569122 GAKO14976 1311 aa10.81□□□□□ -0.68
SMG1-216ENST00000569122 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
SMG1-216ENST00000569122 DDTLA6NHG4 134 aaPredicted RBP10.8□□□□□ -0.68
SMG1-216ENST00000569122 C19orf81C9J6K1 198 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 EYA2O00167 538 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
SMG1-216ENST00000569122 CAP2P40123 477 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 CCNA1P78396 465 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 PICALMQ13492 652 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 SH3BP5LQ7L8J4 393 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 PLEKHH3Q7Z736 793 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 WDR63Q8IWG1 891 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 LPAR1Q92633 364 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 FAM122AQ96E09 287 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 APBA2Q99767 749 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
SMG1-216ENST00000569122 DNM1LO00429 736 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 BACE1P56817 501 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 EXOSC9Q06265 439 aaKnown RBP10.79□□□□□ -0.68
SMG1-216ENST00000569122 ARRDC4Q8NCT1 418 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
SMG1-216ENST00000569122 WDR18Q9BV38 432 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 GINM1Q9NU53 330 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 CEP126Q9P2H0 1117 aa10.79□□□□□ -0.68
SMG1-216ENST00000569122 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
SMG1-216ENST00000569122 SPTBN5Q9NRC6 3674 aaKnown RBP10.79□□□□□ -0.68
SMG1-216ENST00000569122 LDHCP07864 332 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 ASNSP08243 561 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 CCND3P30281 292 aaPredicted RBP10.78□□□□□ -0.68
SMG1-216ENST00000569122 PLA2G5P39877 138 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 BTDP43251 543 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 HERVK_113P62684 666 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 ERVK-9P63128 1117 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 ERVK-24P63145 666 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 GSTO1P78417 241 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 SHHQ15465 462 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 ATP2B3Q16720 1220 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 MORN1Q5T089 497 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 ANKRD44Q8N8A2 993 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 USP6NLQ92738 828 aa10.78□□□□□ -0.68
SMG1-216ENST00000569122 P2RX7Q99572 595 aaKnown RBP10.78□□□□□ -0.68
SMG1-216ENST00000569122 DDX20Q9UHI6 824 aaKnown RBP10.78□□□□□ -0.68
SMG1-216ENST00000569122 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
SMG1-216ENST00000569122 RTP1P59025 263 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 MAP2K5Q13163 448 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 CCDC84Q86UT8 332 aaPredicted RBP10.77□□□□□ -0.69
SMG1-216ENST00000569122 ATXN2LQ8WWM7 1075 aaKnown RBP10.77□□□□□ -0.69
SMG1-216ENST00000569122 DDX4Q9NQI0 724 aaKnown RBP10.77□□□□□ -0.69
SMG1-216ENST00000569122 PI4KBQ9UBF8 816 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 ABCF2Q9UG63 623 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 HDAC5Q9UQL6 1122 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 ATP11BQ9Y2G3 1177 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 PDS5AQ29RF7 1337 aaKnown RBP10.77□□□□□ -0.69
SMG1-216ENST00000569122 TTC28Q96AY4 2481 aa10.77□□□□□ -0.69
SMG1-216ENST00000569122 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
SMG1-216ENST00000569122 GPR75-ASB3A0A0A6YYF3 556 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 KBTBD13C9JR72 458 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 CIAO1O76071 339 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 CNGA1P29973 690 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 IL27Q8NEV9 243 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 KLHDC4Q8TBB5 520 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 DHX36Q9H2U1 1008 aaKnown RBP10.76□□□□□ -0.69
SMG1-216ENST00000569122 TTYH1Q9H313 450 aaPredicted RBP10.76□□□□□ -0.69
SMG1-216ENST00000569122 PRDM5Q9NQX1 630 aaPredicted RBP10.76□□□□□ -0.69
SMG1-216ENST00000569122 RBPJLQ9UBG7 517 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 RABGAP1Q9Y3P9 1069 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 MROH7-TTC4A0A0A0MT08 1334 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 MGAMO43451 1857 aa10.76□□□□□ -0.69
SMG1-216ENST00000569122 RFX7Q2KHR2 1363 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms