RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FANCBQ8NB91 859 aa21.06■□□□□ 0.96
SMPD3-211ENST00000568373 ZSCAN10Q96SZ4 725 aaPredicted RBP21.06■□□□□ 0.96
SMPD3-211ENST00000568373 PCDHA7Q9UN72 937 aa21.06■□□□□ 0.96
SMPD3-211ENST00000568373 BBOX1O75936 387 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 ATP2B4P23634 1241 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 HOXA10P31260 410 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-211ENST00000568373 ADALQ6DHV7 355 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 TRIM22Q8IYM9 498 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 ENAHQ8N8S7 591 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-211ENST00000568373 ARPP21Q9UBL0 812 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-211ENST00000568373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMPD3-211ENST00000568373 MRVI1Q9Y6F6 885 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 UFL1O94874 794 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 FAM160A1Q05DH4 1040 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 SNW1Q13573 536 aaKnown RBP21.05■□□□□ 0.96
SMPD3-211ENST00000568373 PPP2R5BQ15173 497 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 SBK1Q52WX2 424 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 IQCA1Q86XH1 822 aa21.05■□□□□ 0.96
SMPD3-211ENST00000568373 GPR101Q96P66 508 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-211ENST00000568373 A0A1W2PQ27 194 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 A0A1W2PQ64 194 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 A0A1W2PQD8 194 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 UBE2Q2LH0YL09 131 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 ORC4O43929 436 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 PRDM1O75626 825 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 CLCN1P35523 988 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 SF3A1Q15459 793 aaKnown RBP21.04■□□□□ 0.96
SMPD3-211ENST00000568373 ANO1Q5XXA6 986 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 NBPF11Q86T75 865 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 FSIP1Q8NA03 581 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 ENGASEQ8NFI3 743 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 USP25Q9UHP3 1055 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 GGA1Q9UJY5 639 aa21.04■□□□□ 0.96
SMPD3-211ENST00000568373 KLRG2A4D1S0 409 aaPredicted RBP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 SPTLC2O15270 562 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 U2AF2P26368 475 aaKnown RBP eCLIP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 ZSCAN30Q86W11 494 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 CRACR2BQ8N4Y2 399 aaPredicted RBP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 FAM200AQ8TCP9 573 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 DLEC1Q9Y238 1755 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 CTAGE5O15320 804 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 SLC3A2P08195 630 aaKnown RBP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 GSTO1P78417 241 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 GNL2Q13823 731 aaKnown RBP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 IFIT1BQ5T764 474 aaKnown RBP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 MRPS27Q92552 414 aaKnown RBP21.03■□□□□ 0.96
SMPD3-211ENST00000568373 CRAMP1Q96RY5 1269 aa21.03■□□□□ 0.96
SMPD3-211ENST00000568373 GUCY1A2P33402 732 aa21.02■□□□□ 0.96
SMPD3-211ENST00000568373 CD209Q9NNX6 404 aa21.02■□□□□ 0.96
SMPD3-211ENST00000568373 PODXL2Q9NZ53 605 aa21.02■□□□□ 0.96
SMPD3-211ENST00000568373 KINO60870 393 aaKnown RBP21.01■□□□□ 0.95
SMPD3-211ENST00000568373 DEXIO95424 95 aa21.01■□□□□ 0.95
SMPD3-211ENST00000568373 EVX2Q03828 476 aa21.01■□□□□ 0.95
SMPD3-211ENST00000568373 SASS6Q6UVJ0 657 aa21.01■□□□□ 0.95
SMPD3-211ENST00000568373 TAOK2Q9UL54 1235 aa21.01■□□□□ 0.95
SMPD3-211ENST00000568373 CATIPQ7Z7H3 387 aa21.01■□□□□ 0.95
SMPD3-211ENST00000568373 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMPD3-211ENST00000568373 CYP2D6P10635 497 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 IL1R1P14778 569 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 GRIK5Q16478 980 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 CMTR1Q8N1G2 835 aaKnown RBP21■□□□□ 0.95
SMPD3-211ENST00000568373 MCM9Q9NXL9 1143 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 CCDC39Q9UFE4 941 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 MKRN1Q9UHC7 482 aaKnown RBP21■□□□□ 0.95
SMPD3-211ENST00000568373 MMP1P03956 469 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 PDE4BQ07343 736 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 SLC39A14Q15043 492 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 ANO6Q4KMQ2 910 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 FMR1NBQ8N0W7 255 aaPredicted RBP21■□□□□ 0.95
SMPD3-211ENST00000568373 CCDC82Q8N4S0 544 aa21■□□□□ 0.95
SMPD3-211ENST00000568373 LRRC37AA6NMS7 1700 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 PLSCR1O15162 318 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 ADCY5O95622 1261 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 BAG3O95817 575 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 PPP4CP60510 307 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 DIXDC1Q155Q3 683 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 ZNF827Q17R98 1081 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 TBC1D16Q8TBP0 767 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 RNF26Q9BY78 433 aaPredicted RBP20.99■□□□□ 0.95
SMPD3-211ENST00000568373 NOL7Q9UMY1 257 aaKnown RBP20.99■□□□□ 0.95
SMPD3-211ENST00000568373 MYH6P13533 1939 aa20.99■□□□□ 0.95
SMPD3-211ENST00000568373 APBA3O96018 575 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 LDHCP07864 332 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 CALM1P0DP23 149 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 CALM2P0DP24 149 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 CALM3P0DP25 149 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 TROAPQ12815 778 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 SAFBQ15424 915 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMPD3-211ENST00000568373 TMC4Q7Z404 712 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 SH3RF3Q8TEJ3 882 aaPredicted RBP20.98■□□□□ 0.95
SMPD3-211ENST00000568373 POLLQ9UGP5 575 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 MROH7-TTC4A0A0A0MT08 1334 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 A0A1B0GVL5 298 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 DDAH1O94760 285 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 USP17L8P0C7I0 530 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 USP5P45974 858 aa20.98■□□□□ 0.95
SMPD3-211ENST00000568373 AXDND1Q5T1B0 1012 aaPredicted RBP20.98■□□□□ 0.95
SMPD3-211ENST00000568373 NOL10Q9BSC4 688 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms