RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-213ENST00000566624 CACNA1FO60840 1977 aa13.46□□□□□ -0.25
RPL4-213ENST00000566624 GCLCP48506 637 aaPredicted RBP13.46□□□□□ -0.25
RPL4-213ENST00000566624 SHHQ15465 462 aa13.46□□□□□ -0.25
RPL4-213ENST00000566624 CCL14Q16627 93 aa13.46□□□□□ -0.25
RPL4-213ENST00000566624 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
RPL4-213ENST00000566624 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
RPL4-213ENST00000566624 PROCA1Q8NCQ7 364 aaPredicted RBP13.46□□□□□ -0.25
RPL4-213ENST00000566624 MORF4L1Q9UBU8 362 aa13.46□□□□□ -0.25
RPL4-213ENST00000566624 LRRFIP2Q9Y608 721 aaKnown RBP13.46□□□□□ -0.25
RPL4-213ENST00000566624 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
RPL4-213ENST00000566624 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
RPL4-213ENST00000566624 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
RPL4-213ENST00000566624 ENTPD3O75355 529 aa13.45□□□□□ -0.26
RPL4-213ENST00000566624 PUM3Q15397 648 aaKnown RBP13.45□□□□□ -0.26
RPL4-213ENST00000566624 C9orf50Q5SZB4 431 aa13.45□□□□□ -0.26
RPL4-213ENST00000566624 UTYO14607 1347 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 FRMPD3Q5JV73 1810 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
RPL4-213ENST00000566624 HMGCS2P54868 508 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 SPP2Q13103 211 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
RPL4-213ENST00000566624 RRP1BQ14684 758 aaKnown RBP13.44□□□□□ -0.26
RPL4-213ENST00000566624 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
RPL4-213ENST00000566624 USP38Q8NB14 1042 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 USP6NLQ92738 828 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
RPL4-213ENST00000566624 LBHD1Q9BQE6 289 aaPredicted RBP13.44□□□□□ -0.26
RPL4-213ENST00000566624 TXNRD2Q9NNW7 524 aa13.44□□□□□ -0.26
RPL4-213ENST00000566624 GAKO14976 1311 aa13.43□□□□□ -0.26
RPL4-213ENST00000566624 IL16Q14005 1332 aa13.43□□□□□ -0.26
RPL4-213ENST00000566624 TNFRSF10AO00220 468 aa13.43□□□□□ -0.26
RPL4-213ENST00000566624 LDHBP07195 334 aaKnown RBP13.43□□□□□ -0.26
RPL4-213ENST00000566624 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
RPL4-213ENST00000566624 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
RPL4-213ENST00000566624 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
RPL4-213ENST00000566624 SRCIN1Q9C0H9 1055 aa13.43□□□□□ -0.26
RPL4-213ENST00000566624 FOSL2P15408 326 aa13.42□□□□□ -0.26
RPL4-213ENST00000566624 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
RPL4-213ENST00000566624 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
RPL4-213ENST00000566624 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
RPL4-213ENST00000566624 EXOSC9Q06265 439 aaKnown RBP13.42□□□□□ -0.26
RPL4-213ENST00000566624 PICALMQ13492 652 aa13.42□□□□□ -0.26
RPL4-213ENST00000566624 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
RPL4-213ENST00000566624 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
RPL4-213ENST00000566624 NUDT12Q9BQG2 462 aa13.42□□□□□ -0.26
RPL4-213ENST00000566624 SENP6Q9GZR1 1112 aaPredicted RBP13.42□□□□□ -0.26
RPL4-213ENST00000566624 SALL1Q9NSC2 1324 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 PLA2G5P39877 138 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 SMAD3P84022 425 aaKnown RBP13.41□□□□□ -0.26
RPL4-213ENST00000566624 SH3D19Q5HYK7 790 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 LPIN2Q92539 896 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
RPL4-213ENST00000566624 PORCNQ9H237 461 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 MYH2Q9UKX2 1941 aa13.41□□□□□ -0.26
RPL4-213ENST00000566624 TBC1D12O60347 775 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 SLC5A1P13866 664 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 RTP1P59025 263 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 PABPC4Q13310 644 aaKnown RBP eCLIP13.4□□□□□ -0.264e-53■■■■■ 31.7
RPL4-213ENST00000566624 Q3C1V9 767 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 MORN1Q5T089 497 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.26
RPL4-213ENST00000566624 RBPJLQ9UBG7 517 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 ATAD5Q96QE3 1844 aa13.4□□□□□ -0.26
RPL4-213ENST00000566624 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
RPL4-213ENST00000566624 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
RPL4-213ENST00000566624 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
RPL4-213ENST00000566624 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
RPL4-213ENST00000566624 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
RPL4-213ENST00000566624 FLRT1Q9NZU1 646 aa13.39□□□□□ -0.27
RPL4-213ENST00000566624 CAP2P40123 477 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 BTDP43251 543 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 PHKA1P46020 1223 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 RHBDL3P58872 404 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 HERVK_113P62684 666 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 JAG1P78504 1218 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 GPR142Q7Z601 462 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 ZNF384Q8TF68 577 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 BADQ92934 168 aa13.38□□□□□ -0.27
RPL4-213ENST00000566624 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
RPL4-213ENST00000566624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPL4-213ENST00000566624 USP17L5A8MUK1 530 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 EYA2O00167 538 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 MAPK4P31152 587 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 HOXA7P31268 230 aaPredicted RBP13.37□□□□□ -0.27
RPL4-213ENST00000566624 RGS2P41220 211 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 IRX3P78415 501 aaPredicted RBP13.37□□□□□ -0.27
RPL4-213ENST00000566624 MTMR2Q13614 643 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 SHROOM1Q2M3G4 852 aaPredicted RBP13.37□□□□□ -0.27
RPL4-213ENST00000566624 SH3RF1Q7Z6J0 888 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 APBA2Q99767 749 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 PRKAG2Q9UGJ0 569 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 RLFQ13129 1914 aa13.37□□□□□ -0.27
RPL4-213ENST00000566624 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
RPL4-213ENST00000566624 DNM1LO00429 736 aa13.36□□□□□ -0.27
RPL4-213ENST00000566624 EPHB4P54760 987 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms