RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 SGSM2O43147 1006 aa16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 TBC1D12O60347 775 aa16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 APPP05067 770 aa16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 TTLL12Q14166 644 aaPredicted RBP16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 HOOK2Q96ED9 719 aa16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 PAPPA2Q9BXP8 1791 aa16.6■□□□□ 0.25
CCNDBP1-206ENST00000565296 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 AK9Q5TCS8 1911 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 HUNKP57058 714 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 DCAF15Q66K64 600 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 EHD4Q9H223 541 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 GABPAQ06546 454 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 RRP1BQ14684 758 aaKnown RBP16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 FOXP4Q8IVH2 680 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 ZNF341Q9BYN7 854 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
CCNDBP1-206ENST00000565296 RAD50Q92878 1312 aa16.58■□□□□ 0.25
CCNDBP1-206ENST00000565296 CDC45O75419 566 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 HLA-DOAP06340 250 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 TDO2P48775 406 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 ALX1Q15699 326 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 SBK1Q52WX2 424 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 RUFY2Q8WXA3 655 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 WRNIP1Q96S55 665 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 ARPP21Q9UBL0 812 aaPredicted RBP16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.24
CCNDBP1-206ENST00000565296 FGAP02671 866 aa16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 INPP5BP32019 993 aa16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 MFAP1P55081 439 aaKnown RBP16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 DAXXQ9UER7 740 aaPredicted RBP16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 NAV1Q8NEY1 1877 aa16.57■□□□□ 0.24
CCNDBP1-206ENST00000565296 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 VGLL4Q14135 290 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 SLC44A5Q8NCS7 719 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 NAPBQ9H115 298 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 MINDY4BA8MYZ0 360 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 SHMT1P34896 483 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 JAG1P78504 1218 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 PTH1RQ03431 593 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 TATDN1Q6P1N9 297 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 ANKRD13AQ8IZ07 590 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
CCNDBP1-206ENST00000565296 SHROOM1Q2M3G4 852 aaPredicted RBP16.55■□□□□ 0.24
CCNDBP1-206ENST00000565296 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
CCNDBP1-206ENST00000565296 SNCAIPQ9Y6H5 919 aa16.55■□□□□ 0.24
CCNDBP1-206ENST00000565296 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 MYH1P12882 1939 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 BAZ2AQ9UIF9 1905 aaKnown RBP16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 ROBO3Q96MS0 1386 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
CCNDBP1-206ENST00000565296 FAM155AB1AL88 458 aaPredicted RBP16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 CTNND1O60716 968 aaKnown RBP16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 CDK8P49336 464 aa16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 ZNF157P51786 506 aaPredicted RBP16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 PPARAQ07869 468 aa16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 CYP4F22Q6NT55 531 aa16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 STK11IPQ8N1F8 1099 aa16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 NBPF3Q9H094 633 aa16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.53■□□□□ 0.24
CCNDBP1-206ENST00000565296 CAP2P40123 477 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 RASAL3Q86YV0 1011 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 INCENPQ9NQS7 918 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 ANAPC4Q9UJX5 808 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 CSADQ9Y600 493 aa16.52■□□□□ 0.24
CCNDBP1-206ENST00000565296 OTOFQ9HC10 1997 aa16.52■□□□□ 0.23
CCNDBP1-206ENST00000565296 GDF11O95390 407 aa16.52■□□□□ 0.23
CCNDBP1-206ENST00000565296 GJA5P36382 358 aa16.52■□□□□ 0.23
CCNDBP1-206ENST00000565296 CASC1Q6TDU7 716 aa16.52■□□□□ 0.23
CCNDBP1-206ENST00000565296 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms