RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 MIGA2Q7L4E1 593 aa16.87■□□□□ 0.29
AC009163.3-201ENST00000563554 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
AC009163.3-201ENST00000563554 TRIM34Q9BYJ4 488 aa16.87■□□□□ 0.29
AC009163.3-201ENST00000563554 ZNF341Q9BYN7 854 aa16.87■□□□□ 0.29
AC009163.3-201ENST00000563554 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
AC009163.3-201ENST00000563554 APPP05067 770 aa16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 POLR3DP05423 398 aaPredicted RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 SLURP2P0DP57 97 aa16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 TDO2P48775 406 aa16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 SAPCD2Q86UD0 394 aa16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 RAD50Q92878 1312 aa16.86■□□□□ 0.29
AC009163.3-201ENST00000563554 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 GSG1L2A8MUP6 293 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 WRNIP1Q96S55 665 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 PI4KBQ9UBF8 816 aa16.85■□□□□ 0.29
AC009163.3-201ENST00000563554 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
AC009163.3-201ENST00000563554 CHMLP26374 656 aa16.84■□□□□ 0.29
AC009163.3-201ENST00000563554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC009163.3-201ENST00000563554 RUFY2Q8WXA3 655 aa16.84■□□□□ 0.29
AC009163.3-201ENST00000563554 NACAP1Q9BZK3 213 aa16.84■□□□□ 0.29
AC009163.3-201ENST00000563554 NAPBQ9H115 298 aa16.84■□□□□ 0.29
AC009163.3-201ENST00000563554 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 CYP2D6P10635 497 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 PARP14Q460N5 1801 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 VPS53Q5VIR6 699 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 GIMAP6Q6P9H5 292 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 ANKRD13AQ8IZ07 590 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 IFNL3Q8IZI9 196 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 KLRG1Q96E93 195 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 EHD4Q9H223 541 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 CSADQ9Y600 493 aa16.83■□□□□ 0.28
AC009163.3-201ENST00000563554 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 USP17L12C9JPN9 530 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 USP17L21D6R901 530 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 CDC45O75419 566 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 PLCD1P51178 756 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 GRM1Q13255 1194 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 DEFB115Q30KQ5 88 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 RGMBQ6NW40 437 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 HHIPL1Q96JK4 782 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 SERPINB13Q9UIV8 391 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 TACC3Q9Y6A5 838 aa16.82■□□□□ 0.28
AC009163.3-201ENST00000563554 ROBO3Q96MS0 1386 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 CYP2D7A0A087X1C5 515 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 TBC1D12O60347 775 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 INPP5BP32019 993 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 VGLL4Q14135 290 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 CYP4F22Q6NT55 531 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
AC009163.3-201ENST00000563554 ZMYM6O95789 1325 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 UNCXA6NJT0 531 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 LDLRAD1Q5T700 205 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 RASAL3Q86YV0 1011 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 ELP3Q9H9T3 547 aa16.8■□□□□ 0.28
AC009163.3-201ENST00000563554 SGSM2O43147 1006 aa16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 ECE1P42892 770 aa16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 SBK1Q52WX2 424 aa16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 ZNF112Q9UJU3 913 aa16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 SNCAIPQ9Y6H5 919 aa16.79■□□□□ 0.28
AC009163.3-201ENST00000563554 MYH6P13533 1939 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 PHF20L1A8MW92 1017 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 GDF11O95390 407 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 SLC10A3P09131 477 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 NOL9Q5SY16 702 aaKnown RBP16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 STK11IPQ8N1F8 1099 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 SLC10A4Q96EP9 437 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 CAPNS2Q96L46 248 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
AC009163.3-201ENST00000563554 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.28
AC009163.3-201ENST00000563554 SHMT1P34896 483 aa16.77■□□□□ 0.28
AC009163.3-201ENST00000563554 GABPAQ06546 454 aa16.77■□□□□ 0.28
AC009163.3-201ENST00000563554 PPARAQ07869 468 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms