RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RPL6Q02878 288 aaKnown RBP8.13□□□□□ -1.11
LINC00254-201ENST00000563416 CYP27C1Q4G0S4 372 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
LINC00254-201ENST00000563416 PIM2Q9P1W9 311 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 MINDY4BA8MYZ0 360 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 F6X3S4 739 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 PF4P02776 101 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 ADMP35318 185 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 ETF1P62495 437 aaKnown RBP8.12□□□□□ -1.11
LINC00254-201ENST00000563416 SNAP47Q5SQN1 464 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 ERMP1Q7Z2K6 904 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 GATA6Q92908 595 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 RHOVQ96L33 236 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 BACH2Q9BYV9 841 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 KBTBD4Q9NVX7 518 aa8.12□□□□□ -1.11
LINC00254-201ENST00000563416 PDE4BQ07343 736 aa8.11□□□□□ -1.11
LINC00254-201ENST00000563416 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
LINC00254-201ENST00000563416 LRP8Q14114 963 aa8.11□□□□□ -1.11
LINC00254-201ENST00000563416 OGFOD3Q6PK18 319 aa8.11□□□□□ -1.11
LINC00254-201ENST00000563416 GATAD2BQ8WXI9 593 aa8.11□□□□□ -1.11
LINC00254-201ENST00000563416 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
LINC00254-201ENST00000563416 PRR19A6NJB7 356 aa8.1□□□□□ -1.11
LINC00254-201ENST00000563416 FAM170BA6NMN3 283 aa8.1□□□□□ -1.11
LINC00254-201ENST00000563416 NTF4P34130 210 aa8.1□□□□□ -1.11
LINC00254-201ENST00000563416 ZNF76P36508 570 aa8.1□□□□□ -1.11
LINC00254-201ENST00000563416 MRRFQ96E11 262 aaKnown RBP8.1□□□□□ -1.11
LINC00254-201ENST00000563416 GFRA2O00451 464 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 CYP26A1O43174 497 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 FAM87AP0C7U9 286 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 CDK8P49336 464 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 BNC2Q6ZN30 1099 aaPredicted RBP8.09□□□□□ -1.11
LINC00254-201ENST00000563416 ZNF765Q7L2R6 523 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 HID1Q8IV36 788 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 GOLM1Q8NBJ4 401 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 SMARCA4P51532 1647 aa8.09□□□□□ -1.11
LINC00254-201ENST00000563416 CILPO75339 1184 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 LRIG2O94898 1065 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 FOSL1P15407 271 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 SSTR4P31391 388 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 GRK4P32298 578 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 EIF4A3P38919 411 aaKnown RBP8.08□□□□□ -1.12
LINC00254-201ENST00000563416 CD97P48960 835 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 ARTNQ5T4W7 220 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 ZFP64Q9NPA5 681 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 COPRSQ9NQ92 184 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 PCMTD2Q9NV79 361 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 PODXL2Q9NZ53 605 aa8.08□□□□□ -1.12
LINC00254-201ENST00000563416 SUPT16HQ9Y5B9 1047 aaKnown RBP8.08□□□□□ -1.12
LINC00254-201ENST00000563416 FAM221AA4D161 298 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 SCAMP3O14828 347 aaKnown RBP8.07□□□□□ -1.12
LINC00254-201ENST00000563416 F13A1P00488 732 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 PGRP06401 933 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 MPP2Q14168 576 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 LDLRAD1Q5T700 205 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 SHISA5Q8N114 240 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 TOP6BLQ8N6T0 577 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 RNF34Q969K3 372 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 PSMG3-AS1Q96PY0 264 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 DUSP23Q9BVJ7 150 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
LINC00254-201ENST00000563416 RECKO95980 971 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 CAP2P40123 477 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 FANCCQ00597 558 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 FAM196AQ6ZSG2 479 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 ARMCX6Q7L4S7 300 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 MFSD2AQ8NA29 543 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 FOXQ1Q9C009 403 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 LRRC4CQ9HCJ2 640 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 PRDM10Q9NQV6 1147 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 ADAM30Q9UKF2 790 aa8.06□□□□□ -1.12
LINC00254-201ENST00000563416 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
LINC00254-201ENST00000563416 KIAA1324LA8MWY0 1029 aaPredicted RBP8.05□□□□□ -1.12
LINC00254-201ENST00000563416 CWF19L2Q2TBE0 894 aaKnown RBP8.05□□□□□ -1.12
LINC00254-201ENST00000563416 FBXL19Q6PCT2 694 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 ARHGAP27Q6ZUM4 889 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 UBE3DQ7Z6J8 389 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 Q8N3U1 123 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 FBRSQ9HAH7 460 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 GTF2IRD1Q9UHL9 959 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 CECR2Q9BXF3 1484 aa8.05□□□□□ -1.12
LINC00254-201ENST00000563416 HYAL3O43820 417 aaPredicted RBP8.04□□□□□ -1.12
LINC00254-201ENST00000563416 GARTP22102 1010 aa8.04□□□□□ -1.12
LINC00254-201ENST00000563416 SLBPQ14493 270 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00254-201ENST00000563416 USP48Q86UV5 1035 aa8.04□□□□□ -1.12
LINC00254-201ENST00000563416 ZNF296Q8WUU4 475 aaPredicted RBP8.04□□□□□ -1.12
LINC00254-201ENST00000563416 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 LEFTY1O75610 366 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 PLCG1P19174 1290 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 HOXA10P31260 410 aaPredicted RBP8.03□□□□□ -1.12
LINC00254-201ENST00000563416 NKG7Q16617 165 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 SLC6A19Q695T7 634 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 ZNF746Q6NUN9 644 aaPredicted RBP8.03□□□□□ -1.12
LINC00254-201ENST00000563416 REC114Q7Z4M0 266 aa8.03□□□□□ -1.12
LINC00254-201ENST00000563416 NBPF11Q86T75 865 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms