RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 MAST2Q6P0Q8 1798 aa23.08■■□□□ 1.29
TRADD-203ENST00000563348 METTL16Q86W50 562 aaKnown RBP23.07■■□□□ 1.28
TRADD-203ENST00000563348 RIOK1Q9BRS2 568 aaKnown RBP23.07■■□□□ 1.28
TRADD-203ENST00000563348 PALD1Q9ULE6 856 aa23.07■■□□□ 1.28
TRADD-203ENST00000563348 AFG3L2Q9Y4W6 797 aa23.07■■□□□ 1.28
TRADD-203ENST00000563348 DOCK2Q92608 1830 aa23.07■■□□□ 1.28
TRADD-203ENST00000563348 MOGSQ13724 837 aa23.06■■□□□ 1.28
TRADD-203ENST00000563348 PKN2Q16513 984 aaKnown RBP23.06■■□□□ 1.28
TRADD-203ENST00000563348 ECHDC1Q9NTX5 307 aa23.06■■□□□ 1.28
TRADD-203ENST00000563348 ZNF532Q9HCE3 1301 aa23.06■■□□□ 1.28
TRADD-203ENST00000563348 MAGEB6P1A0A0J9YX57 407 aa23.05■■□□□ 1.28
TRADD-203ENST00000563348 TCRBV5S4A2TA0A5A2 114 aa23.05■■□□□ 1.28
TRADD-203ENST00000563348 CAP2P40123 477 aa23.05■■□□□ 1.28
TRADD-203ENST00000563348 USP5P45974 858 aa23.05■■□□□ 1.28
TRADD-203ENST00000563348 ANKRD23Q86SG2 305 aa23.05■■□□□ 1.28
TRADD-203ENST00000563348 SP3Q02447 781 aa23.04■■□□□ 1.28
TRADD-203ENST00000563348 RRP1BQ14684 758 aaKnown RBP23.04■■□□□ 1.28
TRADD-203ENST00000563348 SAP30BPQ9UHR5 308 aaKnown RBP23.04■■□□□ 1.28
TRADD-203ENST00000563348 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
TRADD-203ENST00000563348 ADD2P35612 726 aa23.03■■□□□ 1.28
TRADD-203ENST00000563348 AAMPQ13685 434 aa23.03■■□□□ 1.28
TRADD-203ENST00000563348 ERO1AQ96HE7 468 aa23.03■■□□□ 1.28
TRADD-203ENST00000563348 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRADD-203ENST00000563348 A0A0G2JLL6 359 aaPredicted RBP23.02■■□□□ 1.28
TRADD-203ENST00000563348 CCDC85CA6NKD9 419 aa23.02■■□□□ 1.28
TRADD-203ENST00000563348 TLR2O60603 784 aa23.02■■□□□ 1.28
TRADD-203ENST00000563348 FASTKD5Q7L8L6 764 aaKnown RBP23.02■■□□□ 1.28
TRADD-203ENST00000563348 PRRT2Q7Z6L0 340 aaPredicted RBP23.02■■□□□ 1.28
TRADD-203ENST00000563348 GPATCH3Q96I76 525 aa23.02■■□□□ 1.28
TRADD-203ENST00000563348 DNAJC18Q9H819 358 aa23.02■■□□□ 1.28
TRADD-203ENST00000563348 PDHXO00330 501 aa23.01■■□□□ 1.27
TRADD-203ENST00000563348 GPAT2Q6NUI2 795 aa23.01■■□□□ 1.27
TRADD-203ENST00000563348 CCDC84Q86UT8 332 aaPredicted RBP23.01■■□□□ 1.27
TRADD-203ENST00000563348 CRACR2BQ8N4Y2 399 aaPredicted RBP23.01■■□□□ 1.27
TRADD-203ENST00000563348 TRIM34Q9BYJ4 488 aa23.01■■□□□ 1.27
TRADD-203ENST00000563348 CRNKL1Q9BZJ0 848 aaKnown RBP23.01■■□□□ 1.27
TRADD-203ENST00000563348 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.01■■□□□ 1.27
TRADD-203ENST00000563348 HDAC1Q13547 482 aaPredicted RBP23■■□□□ 1.27
TRADD-203ENST00000563348 UBE3CQ15386 1083 aa23■■□□□ 1.27
TRADD-203ENST00000563348 TTC6Q86TZ1 520 aa23■■□□□ 1.27
TRADD-203ENST00000563348 CD99L2Q8TCZ2 262 aa23■■□□□ 1.27
TRADD-203ENST00000563348 TBC1D2Q9BYX2 928 aa23■■□□□ 1.27
TRADD-203ENST00000563348 TRIM75PA6NK02 468 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 USP17L5A8MUK1 530 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 SLFNL1Q499Z3 407 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 ZSCAN25Q6NSZ9 544 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 FBXO46Q6PJ61 603 aaPredicted RBP22.99■■□□□ 1.27
TRADD-203ENST00000563348 ZNF280CQ8ND82 737 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 GINM1Q9NU53 330 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 TRIM17Q9Y577 477 aa22.99■■□□□ 1.27
TRADD-203ENST00000563348 SPP2Q13103 211 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 SLC4A8Q2Y0W8 1093 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 TSHZ3Q63HK5 1081 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 C17orf99Q6UX52 265 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 OTOP1Q7RTM1 612 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 LCORLQ8N3X6 602 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 EHD4Q9H223 541 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 HPS5Q9UPZ3 1129 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 CDK5RAP2Q96SN8 1893 aa22.98■■□□□ 1.27
TRADD-203ENST00000563348 ASNSP08243 561 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 JAG1P78504 1218 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 GADL1Q6ZQY3 521 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 ARMT1Q9H993 441 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 EFCC1Q9HA90 598 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 SERPINB13Q9UIV8 391 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 TTC41PQ6P2S7 1318 aa22.97■■□□□ 1.27
TRADD-203ENST00000563348 FOCADQ5VW36 1801 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 CHGBP05060 677 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 PLCD1P51178 756 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 CAP1Q01518 475 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 ARHGEF6Q15052 776 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 ANKRD45Q5TZF3 282 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 TATDN1Q6P1N9 297 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 KBTBD3Q8NAB2 608 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 WDR18Q9BV38 432 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 AS3MTQ9HBK9 375 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 DCP1AQ9NPI6 582 aaPredicted RBP22.96■■□□□ 1.27
TRADD-203ENST00000563348 MCM9Q9NXL9 1143 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 SLC45A1Q9Y2W3 748 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 DOCK1Q14185 1865 aa22.96■■□□□ 1.27
TRADD-203ENST00000563348 SIPA1L1O43166 1804 aa22.95■■□□□ 1.26
TRADD-203ENST00000563348 MBD4O95243 580 aa22.95■■□□□ 1.26
TRADD-203ENST00000563348 POLR3DP05423 398 aaPredicted RBP22.95■■□□□ 1.26
TRADD-203ENST00000563348 OTUD7AQ8TE49 926 aaPredicted RBP22.95■■□□□ 1.26
TRADD-203ENST00000563348 SDR42E1Q8WUS8 393 aa22.95■■□□□ 1.26
TRADD-203ENST00000563348 PARK7Q99497 189 aaKnown RBP22.95■■□□□ 1.26
TRADD-203ENST00000563348 ADGRA2Q96PE1 1338 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 ERC2O15083 957 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 PRKAB2O43741 272 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 GDF11O95390 407 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 ATP8A2Q9NTI2 1148 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
TRADD-203ENST00000563348 CPA4Q9UI42 421 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 ZBTB21Q9ULJ3 1066 aa22.94■■□□□ 1.26
TRADD-203ENST00000563348 SUPT16HQ9Y5B9 1047 aaKnown RBP22.94■■□□□ 1.26
TRADD-203ENST00000563348 GLRX3O76003 335 aaKnown RBP22.93■■□□□ 1.26
TRADD-203ENST00000563348 CYP2C8P10632 490 aa22.93■■□□□ 1.26
TRADD-203ENST00000563348 SHROOM1Q2M3G4 852 aaPredicted RBP22.93■■□□□ 1.26
TRADD-203ENST00000563348 SH3D19Q5HYK7 790 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms