RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 HOXA10P31260 410 aaPredicted RBP10.05□□□□□ -0.8
SMG1-204ENST00000561940 GBP2P32456 591 aaPredicted RBP10.05□□□□□ -0.8
SMG1-204ENST00000561940 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
SMG1-204ENST00000561940 WIPI1Q5MNZ9 446 aaPredicted RBP10.05□□□□□ -0.8
SMG1-204ENST00000561940 RELL1Q8IUW5 271 aa10.05□□□□□ -0.8
SMG1-204ENST00000561940 HYAL3O43820 417 aaPredicted RBP10.04□□□□□ -0.8
SMG1-204ENST00000561940 RLBP1P12271 317 aa10.04□□□□□ -0.8
SMG1-204ENST00000561940 ZNF765Q7L2R6 523 aa10.04□□□□□ -0.8
SMG1-204ENST00000561940 HDXQ7Z353 690 aa10.04□□□□□ -0.8
SMG1-204ENST00000561940 C8orf37Q96NL8 207 aa10.04□□□□□ -0.8
SMG1-204ENST00000561940 COPRSQ9NQ92 184 aa10.04□□□□□ -0.8
SMG1-204ENST00000561940 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
SMG1-204ENST00000561940 PF4P02776 101 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 NTF4P34130 210 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 RING1Q06587 406 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 NAALADL2Q58DX5 795 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 ZBTB37Q5TC79 503 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 SCARA3Q6AZY7 606 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 CDC37L1Q7L3B6 337 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 LRRC4CQ9HCJ2 640 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
SMG1-204ENST00000561940 COBLO75128 1261 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 LEFTY1O75610 366 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 FAM87AP0C7U9 286 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 RACK1P63244 317 aaKnown RBP10.02□□□□□ -0.81
SMG1-204ENST00000561940 ARTNQ5T4W7 220 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 DUSP27Q5VZP5 1158 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 BNC2Q6ZN30 1099 aaPredicted RBP10.02□□□□□ -0.81
SMG1-204ENST00000561940 CYFIP1Q7L576 1253 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 HS2ST1Q7LGA3 356 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 TGIF2Q9GZN2 237 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 GGT7Q9UJ14 662 aa10.02□□□□□ -0.81
SMG1-204ENST00000561940 FANCGO15287 622 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 TNNI2P48788 182 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 ETF1P62495 437 aaKnown RBP10.01□□□□□ -0.81
SMG1-204ENST00000561940 CAMK2GQ13555 558 aaPredicted RBP10.01□□□□□ -0.81
SMG1-204ENST00000561940 LRP8Q14114 963 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 OGFOD3Q6PK18 319 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 TMEM74Q96NL1 305 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 ZFP64Q9NPA5 681 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 PCMTD2Q9NV79 361 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
SMG1-204ENST00000561940 USP48Q86UV5 1035 aa10□□□□□ -0.81
SMG1-204ENST00000561940 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
SMG1-204ENST00000561940 DDX41Q9UJV9 622 aaKnown RBP10□□□□□ -0.81
SMG1-204ENST00000561940 EPB41L3Q9Y2J2 1087 aaPredicted RBP10□□□□□ -0.81
SMG1-204ENST00000561940 SNCAIPQ9Y6H5 919 aa10□□□□□ -0.81
SMG1-204ENST00000561940 CYP26A1O43174 497 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 GRIK1P39086 918 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 ERMP1Q7Z2K6 904 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 TOP6BLQ8N6T0 577 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 ZNF507Q8TCN5 953 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 TINF2Q9BSI4 451 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 METTL22Q9BUU2 404 aaPredicted RBP9.99□□□□□ -0.81
SMG1-204ENST00000561940 CCSER2Q9H7U1 834 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 FBRSQ9HAH7 460 aa9.99□□□□□ -0.81
SMG1-204ENST00000561940 GFRA2O00451 464 aa9.98□□□□□ -0.81
SMG1-204ENST00000561940 GRK4P32298 578 aa9.98□□□□□ -0.81
SMG1-204ENST00000561940 CD97P48960 835 aa9.98□□□□□ -0.81
SMG1-204ENST00000561940 LMNB2Q03252 620 aa9.98□□□□□ -0.81
SMG1-204ENST00000561940 WNT10AQ9GZT5 417 aa9.98□□□□□ -0.81
SMG1-204ENST00000561940 F13A1P00488 732 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 CYP27A1Q02318 531 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 NKG7Q16617 165 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 GOLM1Q8NBJ4 401 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 PSMG3-AS1Q96PY0 264 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 DUSP23Q9BVJ7 150 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 CAPN10Q9HC96 672 aa9.97□□□□□ -0.81
SMG1-204ENST00000561940 FOSL1P15407 271 aa9.96□□□□□ -0.82
SMG1-204ENST00000561940 CYP27C1Q4G0S4 372 aa9.96□□□□□ -0.82
SMG1-204ENST00000561940 SNAP47Q5SQN1 464 aa9.96□□□□□ -0.82
SMG1-204ENST00000561940 INTS5Q6P9B9 1019 aaKnown RBP9.96□□□□□ -0.82
SMG1-204ENST00000561940 RHOVQ96L33 236 aa9.96□□□□□ -0.82
SMG1-204ENST00000561940 RPL6Q02878 288 aaKnown RBP9.95□□□□□ -0.82
SMG1-204ENST00000561940 PWP1Q13610 501 aa9.95□□□□□ -0.82
SMG1-204ENST00000561940 FAM181AQ8N9Y4 354 aa9.95□□□□□ -0.82
SMG1-204ENST00000561940 XAGE3Q8WTP9 111 aa9.95□□□□□ -0.82
SMG1-204ENST00000561940 CORINQ9Y5Q5 1042 aa9.95□□□□□ -0.82
SMG1-204ENST00000561940 RBAK-RBAKDNI3L0D1 243 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 TLR3O15455 904 aaKnown RBP9.94□□□□□ -0.82
SMG1-204ENST00000561940 BPNT1O95861 308 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 PGRP06401 933 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 SLBPQ14493 270 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMG1-204ENST00000561940 ARMCX6Q7L4S7 300 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 ZNF654Q8IZM8 581 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 KCT2Q8NC54 265 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 FBXO27Q8NI29 283 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 GATAD2BQ8WXI9 593 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 PRDM10Q9NQV6 1147 aa9.94□□□□□ -0.82
SMG1-204ENST00000561940 ZC3H7BQ9UGR2 993 aaKnown RBP9.94□□□□□ -0.82
SMG1-204ENST00000561940 FAM221AA4D161 298 aa9.93□□□□□ -0.82
SMG1-204ENST00000561940 ADAMTS4O75173 837 aa9.93□□□□□ -0.82
SMG1-204ENST00000561940 CILPO75339 1184 aa9.93□□□□□ -0.82
SMG1-204ENST00000561940 FBXL19Q6PCT2 694 aa9.93□□□□□ -0.82
SMG1-204ENST00000561940 NBPF11Q86T75 865 aa9.93□□□□□ -0.82
SMG1-204ENST00000561940 SREK1Q8WXA9 508 aaKnown RBP9.93□□□□□ -0.82
SMG1-204ENST00000561940 U3KQE9 123 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms