RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TDO2P48775 406 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 EVX2Q03828 476 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 SAPCD2Q86UD0 394 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 METTL16Q86W50 562 aaKnown RBP25.93■■□□□ 1.74
SNX1-206ENST00000559389 DNAJC18Q9H819 358 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 ROBO3Q96MS0 1386 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 FAM196BA6NMK8 535 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 USP17L12C9JPN9 530 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 USP17L21D6R901 530 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 IREB2P48200 963 aaKnown RBP25.92■■□□□ 1.74
SNX1-206ENST00000559389 PLCD1P51178 756 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 SBK1Q52WX2 424 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 C12orf60Q5U649 245 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 CTR9Q6PD62 1173 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.92■■□□□ 1.74
SNX1-206ENST00000559389 KLRG1Q96E93 195 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 NAPBQ9H115 298 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 ABT1Q9ULW3 272 aaKnown RBP25.92■■□□□ 1.74
SNX1-206ENST00000559389 LAMA4Q16363 1823 aa25.92■■□□□ 1.74
SNX1-206ENST00000559389 CYP2D7A0A087X1C5 515 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 LDLRAD1Q5T700 205 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 FOXP4Q8IVH2 680 aaPredicted RBP25.91■■□□□ 1.74
SNX1-206ENST00000559389 AMOTL1Q8IY63 956 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 ESYT1Q9BSJ8 1104 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 SERPINB13Q9UIV8 391 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 ZNF112Q9UJU3 913 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 DOCK1Q14185 1865 aa25.91■■□□□ 1.74
SNX1-206ENST00000559389 UBE2Q2LH0YL09 131 aa25.9■■□□□ 1.74
SNX1-206ENST00000559389 HUNKP57058 714 aa25.9■■□□□ 1.74
SNX1-206ENST00000559389 GABPAQ06546 454 aa25.9■■□□□ 1.74
SNX1-206ENST00000559389 ALX1Q15699 326 aa25.9■■□□□ 1.74
SNX1-206ENST00000559389 CASC1Q6TDU7 716 aa25.9■■□□□ 1.74
SNX1-206ENST00000559389 CRACR2BQ8N4Y2 399 aaPredicted RBP25.9■■□□□ 1.74
SNX1-206ENST00000559389 WRNIP1Q96S55 665 aa25.9■■□□□ 1.74
SNX1-206ENST00000559389 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.9■■□□□ 1.74
SNX1-206ENST00000559389 PHF20L1A8MW92 1017 aa25.89■■□□□ 1.74
SNX1-206ENST00000559389 HHIPL1Q96JK4 782 aa25.89■■□□□ 1.74
SNX1-206ENST00000559389 DSCC1Q9BVC3 393 aa25.89■■□□□ 1.74
SNX1-206ENST00000559389 TAOK2Q9UL54 1235 aa25.89■■□□□ 1.74
SNX1-206ENST00000559389 UNCXA6NJT0 531 aa25.88■■□□□ 1.73
SNX1-206ENST00000559389 SMIM22K7EJ46 135 aa25.88■■□□□ 1.73
SNX1-206ENST00000559389 ANKRD13AQ8IZ07 590 aa25.88■■□□□ 1.73
SNX1-206ENST00000559389 TRIM34Q9BYJ4 488 aa25.88■■□□□ 1.73
SNX1-206ENST00000559389 ATAD5Q96QE3 1844 aa25.87■■□□□ 1.73
SNX1-206ENST00000559389 RASSF10A6NK89 507 aa25.87■■□□□ 1.73
SNX1-206ENST00000559389 INPP5BP32019 993 aa25.87■■□□□ 1.73
SNX1-206ENST00000559389 HTRA3P83110 453 aa25.87■■□□□ 1.73
SNX1-206ENST00000559389 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.87■■□□□ 1.73
SNX1-206ENST00000559389 FGAP02671 866 aa25.86■■□□□ 1.73
SNX1-206ENST00000559389 MAP3K9P80192 1104 aa25.86■■□□□ 1.73
SNX1-206ENST00000559389 VGLL4Q14135 290 aa25.86■■□□□ 1.73
SNX1-206ENST00000559389 NOL9Q5SY16 702 aaKnown RBP25.86■■□□□ 1.73
SNX1-206ENST00000559389 MYH8P13535 1937 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 MINDY4BA8MYZ0 360 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 TATDN1Q6P1N9 297 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 C16orf86Q6ZW13 317 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 SLC44A5Q8NCS7 719 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 DYNLL2Q96FJ2 89 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 CLMNQ96JQ2 1002 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 SWAP70Q9UH65 585 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 SNCAIPQ9Y6H5 919 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 THSD7BQ9C0I4 1608 aa25.85■■□□□ 1.73
SNX1-206ENST00000559389 SHMT1P34896 483 aa25.84■■□□□ 1.73
SNX1-206ENST00000559389 PPARAQ07869 468 aa25.84■■□□□ 1.73
SNX1-206ENST00000559389 RGMBQ6NW40 437 aa25.84■■□□□ 1.73
SNX1-206ENST00000559389 CSADQ9Y600 493 aa25.84■■□□□ 1.73
SNX1-206ENST00000559389 PTH1RQ03431 593 aa25.83■■□□□ 1.73
SNX1-206ENST00000559389 RRP1BQ14684 758 aaKnown RBP25.83■■□□□ 1.73
SNX1-206ENST00000559389 ZKSCAN4Q969J2 545 aaPredicted RBP25.83■■□□□ 1.73
SNX1-206ENST00000559389 ANAPC4Q9UJX5 808 aa25.83■■□□□ 1.73
SNX1-206ENST00000559389 CTNND1O60716 968 aaKnown RBP25.82■■□□□ 1.72
SNX1-206ENST00000559389 RASAL3Q86YV0 1011 aa25.82■■□□□ 1.72
SNX1-206ENST00000559389 SCYL3Q8IZE3 742 aa25.82■■□□□ 1.72
SNX1-206ENST00000559389 LSG1Q9H089 658 aaKnown RBP25.82■■□□□ 1.72
SNX1-206ENST00000559389 CAP2P40123 477 aa25.81■■□□□ 1.72
SNX1-206ENST00000559389 DEFB115Q30KQ5 88 aa25.81■■□□□ 1.72
SNX1-206ENST00000559389 SLC10A3P09131 477 aa25.8■■□□□ 1.72
SNX1-206ENST00000559389 CDK8P49336 464 aa25.8■■□□□ 1.72
SNX1-206ENST00000559389 KIAA1211Q6ZU35 1233 aa25.8■■□□□ 1.72
SNX1-206ENST00000559389 ELP3Q9H9T3 547 aa25.8■■□□□ 1.72
SNX1-206ENST00000559389 CTNNA3Q9UI47 895 aa25.8■■□□□ 1.72
SNX1-206ENST00000559389 PHIPQ8WWQ0 1821 aa25.79■■□□□ 1.72
SNX1-206ENST00000559389 GREB1LQ9C091 1923 aaPredicted RBP25.79■■□□□ 1.72
SNX1-206ENST00000559389 SPDYE5A6NIY4 337 aa25.79■■□□□ 1.72
SNX1-206ENST00000559389 SLC3A2P08195 630 aaKnown RBP25.79■■□□□ 1.72
SNX1-206ENST00000559389 ZNF157P51786 506 aaPredicted RBP25.79■■□□□ 1.72
SNX1-206ENST00000559389 MAP4K1Q92918 833 aa25.79■■□□□ 1.72
SNX1-206ENST00000559389 NBPF3Q9H094 633 aa25.79■■□□□ 1.72
SNX1-206ENST00000559389 ANO2Q9NQ90 1003 aa25.79■■□□□ 1.72
SNX1-206ENST00000559389 U3KPZ7 1027 aaPredicted RBP25.79■■□□□ 1.72
SNX1-206ENST00000559389 FAM155AB1AL88 458 aaPredicted RBP25.78■■□□□ 1.72
SNX1-206ENST00000559389 GDF11O95390 407 aa25.78■■□□□ 1.72
SNX1-206ENST00000559389 HAND2P61296 217 aa25.78■■□□□ 1.72
SNX1-206ENST00000559389 CTDSPL2Q05D32 466 aa25.78■■□□□ 1.72
SNX1-206ENST00000559389 SHROOM1Q2M3G4 852 aaPredicted RBP25.78■■□□□ 1.72
SNX1-206ENST00000559389 CYP4F22Q6NT55 531 aa25.78■■□□□ 1.72
SNX1-206ENST00000559389 PAXIP1Q6ZW49 1069 aaPredicted RBP25.78■■□□□ 1.72
SNX1-206ENST00000559389 SLC10A4Q96EP9 437 aa25.78■■□□□ 1.72
SNX1-206ENST00000559389 ZBTB21Q9ULJ3 1066 aa25.78■■□□□ 1.72
SNX1-206ENST00000559389 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms