RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PRRT2Q7Z6L0 340 aaPredicted RBP20.78■□□□□ 0.92
LRRC28-210ENST00000558879 PTPN22Q9Y2R2 807 aa20.78■□□□□ 0.92
LRRC28-210ENST00000558879 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
LRRC28-210ENST00000558879 NDUFB9Q9Y6M9 179 aa20.78■□□□□ 0.92
LRRC28-210ENST00000558879 KIAA0100Q14667 2235 aaKnown RBP20.78■□□□□ 0.92
LRRC28-210ENST00000558879 TMED8Q6PL24 325 aaPredicted RBP20.77■□□□□ 0.92
LRRC28-210ENST00000558879 ANTXR1Q9H6X2 564 aa20.77■□□□□ 0.92
LRRC28-210ENST00000558879 EFCC1Q9HA90 598 aa20.77■□□□□ 0.92
LRRC28-210ENST00000558879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.77■□□□□ 0.92
LRRC28-210ENST00000558879 PICK1Q9NRD5 415 aa20.77■□□□□ 0.92
LRRC28-210ENST00000558879 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.92
LRRC28-210ENST00000558879 PDHXO00330 501 aa20.76■□□□□ 0.91
LRRC28-210ENST00000558879 GPAT2Q6NUI2 795 aa20.76■□□□□ 0.91
LRRC28-210ENST00000558879 CLASRPQ8N2M8 674 aaKnown RBP20.76■□□□□ 0.91
LRRC28-210ENST00000558879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.76■□□□□ 0.91
LRRC28-210ENST00000558879 DHX36Q9H2U1 1008 aaKnown RBP20.76■□□□□ 0.91
LRRC28-210ENST00000558879 HERC5Q9UII4 1024 aaKnown RBP20.76■□□□□ 0.91
LRRC28-210ENST00000558879 ZHX2Q9Y6X8 837 aa20.76■□□□□ 0.91
LRRC28-210ENST00000558879 RAB11FIP3O75154 756 aa20.75■□□□□ 0.91
LRRC28-210ENST00000558879 IDH1O75874 414 aaKnown RBP20.75■□□□□ 0.91
LRRC28-210ENST00000558879 C17orf99Q6UX52 265 aa20.75■□□□□ 0.91
LRRC28-210ENST00000558879 METTL16Q86W50 562 aaKnown RBP20.75■□□□□ 0.91
LRRC28-210ENST00000558879 DNAJC18Q9H819 358 aa20.75■□□□□ 0.91
LRRC28-210ENST00000558879 CYP7A1P22680 504 aa20.74■□□□□ 0.91
LRRC28-210ENST00000558879 DYNLL1P63167 89 aaKnown RBP20.74■□□□□ 0.91
LRRC28-210ENST00000558879 LACTBP83111 547 aaPredicted RBP20.74■□□□□ 0.91
LRRC28-210ENST00000558879 RRP1BQ14684 758 aaKnown RBP20.74■□□□□ 0.91
LRRC28-210ENST00000558879 CERS3Q8IU89 383 aa20.74■□□□□ 0.91
LRRC28-210ENST00000558879 MAPKAPK5Q8IW41 473 aa20.74■□□□□ 0.91
LRRC28-210ENST00000558879 TGFBRAP1Q8WUH2 860 aa20.74■□□□□ 0.91
LRRC28-210ENST00000558879 PI4KBQ9UBF8 816 aa20.74■□□□□ 0.91
LRRC28-210ENST00000558879 CAP2P40123 477 aa20.73■□□□□ 0.91
LRRC28-210ENST00000558879 CCDC84Q86UT8 332 aaPredicted RBP20.73■□□□□ 0.91
LRRC28-210ENST00000558879 MAGEB6Q8N7X4 407 aa20.73■□□□□ 0.91
LRRC28-210ENST00000558879 SLC45A1Q9Y2W3 748 aa20.73■□□□□ 0.91
LRRC28-210ENST00000558879 BRCA2P51587 3418 aa20.72■□□□□ 0.91
LRRC28-210ENST00000558879 APBB1O00213 710 aa20.72■□□□□ 0.91
LRRC28-210ENST00000558879 MAP3K12Q12852 859 aa20.72■□□□□ 0.91
LRRC28-210ENST00000558879 FASTKD5Q7L8L6 764 aaKnown RBP20.72■□□□□ 0.91
LRRC28-210ENST00000558879 ARMC5Q96C12 935 aa20.72■□□□□ 0.91
LRRC28-210ENST00000558879 PARK7Q99497 189 aaKnown RBP20.72■□□□□ 0.91
LRRC28-210ENST00000558879 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
LRRC28-210ENST00000558879 ARHGAP39Q9C0H5 1083 aa20.72■□□□□ 0.91
LRRC28-210ENST00000558879 BCRP11274 1271 aa20.71■□□□□ 0.91
LRRC28-210ENST00000558879 CTGFP29279 349 aa20.71■□□□□ 0.91
LRRC28-210ENST00000558879 ARHGEF6Q15052 776 aa20.71■□□□□ 0.91
LRRC28-210ENST00000558879 TTF1Q15361 905 aaPredicted RBP20.71■□□□□ 0.91
LRRC28-210ENST00000558879 CPA4Q9UI42 421 aa20.71■□□□□ 0.91
LRRC28-210ENST00000558879 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
LRRC28-210ENST00000558879 IFIT2P09913 472 aaKnown RBP20.7■□□□□ 0.9
LRRC28-210ENST00000558879 MIGA1Q8NAN2 632 aa20.7■□□□□ 0.9
LRRC28-210ENST00000558879 RIOK1Q9BRS2 568 aaKnown RBP20.7■□□□□ 0.9
LRRC28-210ENST00000558879 PALD1Q9ULE6 856 aa20.7■□□□□ 0.9
LRRC28-210ENST00000558879 TRIM75PA6NK02 468 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 GNRH1P01148 92 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 CYP2C8P10632 490 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 GADL1Q6ZQY3 521 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 PROCA1Q8NCQ7 364 aaPredicted RBP20.69■□□□□ 0.9
LRRC28-210ENST00000558879 AGTPBP1Q9UPW5 1226 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 PTCH2Q9Y6C5 1203 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 PARP14Q460N5 1801 aa20.69■□□□□ 0.9
LRRC28-210ENST00000558879 PDE6AP16499 860 aa20.68■□□□□ 0.9
LRRC28-210ENST00000558879 KIF22Q14807 665 aa20.68■□□□□ 0.9
LRRC28-210ENST00000558879 FOXP4Q8IVH2 680 aaPredicted RBP20.68■□□□□ 0.9
LRRC28-210ENST00000558879 ZNF280CQ8ND82 737 aa20.68■□□□□ 0.9
LRRC28-210ENST00000558879 TCRBV5S4A2TA0A5A2 114 aa20.67■□□□□ 0.9
LRRC28-210ENST00000558879 USP17L5A8MUK1 530 aa20.67■□□□□ 0.9
LRRC28-210ENST00000558879 HLA-DOAP06340 250 aa20.67■□□□□ 0.9
LRRC28-210ENST00000558879 SH3D19Q5HYK7 790 aa20.67■□□□□ 0.9
LRRC28-210ENST00000558879 EHD4Q9H223 541 aa20.67■□□□□ 0.9
LRRC28-210ENST00000558879 SAP30BPQ9UHR5 308 aaKnown RBP20.67■□□□□ 0.9
LRRC28-210ENST00000558879 GOLIM4O00461 696 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 ASNSP08243 561 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 ATP5JP18859 108 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 PRMT2P55345 433 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 JAG1P78504 1218 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 SPP2Q13103 211 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 TREML2Q5T2D2 321 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
LRRC28-210ENST00000558879 ZNF333Q96JL9 665 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 TRIM47Q96LD4 638 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 DNAJC2Q99543 621 aaKnown RBP20.66■□□□□ 0.9
LRRC28-210ENST00000558879 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 GINM1Q9NU53 330 aa20.66■□□□□ 0.9
LRRC28-210ENST00000558879 GREB1LQ9C091 1923 aaPredicted RBP20.65■□□□□ 0.9
LRRC28-210ENST00000558879 ZNF532Q9HCE3 1301 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 USP5P45974 858 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 SHROOM1Q2M3G4 852 aaPredicted RBP20.65■□□□□ 0.9
LRRC28-210ENST00000558879 SLC9C2Q5TAH2 1124 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 CRACR2BQ8N4Y2 399 aaPredicted RBP20.65■□□□□ 0.9
LRRC28-210ENST00000558879 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 AS3MTQ9HBK9 375 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 PAG1Q9NWQ8 432 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 ZBTB21Q9ULJ3 1066 aa20.65■□□□□ 0.9
LRRC28-210ENST00000558879 PSMC4P43686 418 aa20.64■□□□□ 0.89
LRRC28-210ENST00000558879 HMGCS2P54868 508 aa20.64■□□□□ 0.89
LRRC28-210ENST00000558879 SLC9C1Q4G0N8 1177 aa20.64■□□□□ 0.89
LRRC28-210ENST00000558879 TATDN1Q6P1N9 297 aa20.64■□□□□ 0.89
LRRC28-210ENST00000558879 HAUS7Q99871 368 aa20.64■□□□□ 0.89
LRRC28-210ENST00000558879 BOLA2Q9H3K6 86 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms