RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 GTF2A2P52657 109 aa27.21■■□□□ 1.95
PABPN1-206ENST00000556809 ERICH6BQ5W0A0 696 aa27.21■■□□□ 1.95
PABPN1-206ENST00000556809 BRI3BPQ8WY22 251 aa27.21■■□□□ 1.95
PABPN1-206ENST00000556809 CCDC136Q96JN2 1154 aa27.21■■□□□ 1.95
PABPN1-206ENST00000556809 DHX36Q9H2U1 1008 aaKnown RBP27.21■■□□□ 1.95
PABPN1-206ENST00000556809 R3HDMLQ9H3Y0 253 aa27.21■■□□□ 1.95
PABPN1-206ENST00000556809 DOCK1Q14185 1865 aa27.21■■□□□ 1.95
PABPN1-206ENST00000556809 ZNF532Q9HCE3 1301 aa27.2■■□□□ 1.95
PABPN1-206ENST00000556809 MYH1P12882 1939 aa27.2■■□□□ 1.95
PABPN1-206ENST00000556809 NOM1Q5C9Z4 860 aaKnown RBP27.2■■□□□ 1.94
PABPN1-206ENST00000556809 CENPQQ7L2Z9 268 aaPredicted RBP27.2■■□□□ 1.94
PABPN1-206ENST00000556809 PHIPQ8WWQ0 1821 aa27.19■■□□□ 1.94
PABPN1-206ENST00000556809 CTNND1O60716 968 aaKnown RBP27.19■■□□□ 1.94
PABPN1-206ENST00000556809 IFFO2Q5TF58 517 aa27.19■■□□□ 1.94
PABPN1-206ENST00000556809 METTL16Q86W50 562 aaKnown RBP27.19■■□□□ 1.94
PABPN1-206ENST00000556809 SCYL3Q8IZE3 742 aa27.19■■□□□ 1.94
PABPN1-206ENST00000556809 PI4KBQ9UBF8 816 aa27.19■■□□□ 1.94
PABPN1-206ENST00000556809 CCL15-CCL14A0A0B4J2E2 113 aa27.18■■□□□ 1.94
PABPN1-206ENST00000556809 FAM196BA6NMK8 535 aa27.18■■□□□ 1.94
PABPN1-206ENST00000556809 ADD2P35612 726 aa27.18■■□□□ 1.94
PABPN1-206ENST00000556809 CCL15Q16663 113 aa27.18■■□□□ 1.94
PABPN1-206ENST00000556809 PLEKHM2Q8IWE5 1019 aa27.18■■□□□ 1.94
PABPN1-206ENST00000556809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.18■■□□□ 1.94
PABPN1-206ENST00000556809 KCNH4Q9UQ05 1017 aa27.18■■□□□ 1.94
PABPN1-206ENST00000556809 DDX60LQ5H9U9 1706 aaKnown RBP27.17■■□□□ 1.94
PABPN1-206ENST00000556809 SNAPC2Q13487 334 aa27.17■■□□□ 1.94
PABPN1-206ENST00000556809 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.17■■□□□ 1.941e-11■■□□□ 14.4
PABPN1-206ENST00000556809 HERC5Q9UII4 1024 aaKnown RBP27.17■■□□□ 1.94
PABPN1-206ENST00000556809 PALD1Q9ULE6 856 aa27.17■■□□□ 1.94
PABPN1-206ENST00000556809 ATAD5Q96QE3 1844 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 MAGEB6P1A0A0J9YX57 407 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 GPR25O00155 361 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 CETPP11597 493 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 PTPRAP18433 802 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 PDE4AP27815 886 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 OTUD7BQ6GQQ9 843 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 OSBPL3Q9H4L5 887 aa27.16■■□□□ 1.94
PABPN1-206ENST00000556809 CHGBP05060 677 aa27.15■■□□□ 1.94
PABPN1-206ENST00000556809 RRP1BQ14684 758 aaKnown RBP27.15■■□□□ 1.94
PABPN1-206ENST00000556809 SLFNL1Q499Z3 407 aa27.15■■□□□ 1.94
PABPN1-206ENST00000556809 FOXP4Q8IVH2 680 aaPredicted RBP27.15■■□□□ 1.94
PABPN1-206ENST00000556809 KBTBD3Q8NAB2 608 aa27.15■■□□□ 1.94
PABPN1-206ENST00000556809 ZNF296Q8WUU4 475 aaPredicted RBP27.15■■□□□ 1.94
PABPN1-206ENST00000556809 DNAJC18Q9H819 358 aa27.15■■□□□ 1.94
PABPN1-206ENST00000556809 UBE3CQ15386 1083 aa27.14■■□□□ 1.94
PABPN1-206ENST00000556809 FAM43AQ8N2R8 423 aa27.14■■□□□ 1.94
PABPN1-206ENST00000556809 SAP30BPQ9UHR5 308 aaKnown RBP27.14■■□□□ 1.94
PABPN1-206ENST00000556809 PTPRFP10586 1907 aa27.14■■□□□ 1.93
PABPN1-206ENST00000556809 USP5P45974 858 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 CRHR2Q13324 411 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 MOGSQ13724 837 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 ZSCAN25Q6NSZ9 544 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 PICK1Q9NRD5 415 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 AFG3L2Q9Y4W6 797 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 ZHX2Q9Y6X8 837 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 NAV1Q8NEY1 1877 aa27.13■■□□□ 1.93
PABPN1-206ENST00000556809 CXCL11O14625 94 aa27.12■■□□□ 1.93
PABPN1-206ENST00000556809 LCORLQ8N3X6 602 aa27.12■■□□□ 1.93
PABPN1-206ENST00000556809 PPP4R2Q9NY27 417 aa27.12■■□□□ 1.93
PABPN1-206ENST00000556809 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.12■■□□□ 1.93
PABPN1-206ENST00000556809 BTBD19C9JJ37 291 aa27.11■■□□□ 1.93
PABPN1-206ENST00000556809 CAP2P40123 477 aa27.11■■□□□ 1.93
PABPN1-206ENST00000556809 CRNKL1Q9BZJ0 848 aaKnown RBP27.11■■□□□ 1.93
PABPN1-206ENST00000556809 ZCCHC17Q9NP64 241 aaKnown RBP27.11■■□□□ 1.93
PABPN1-206ENST00000556809 FSD1Q9BTV5 496 aa27.1■■□□□ 1.93
PABPN1-206ENST00000556809 ARMT1Q9H993 441 aa27.1■■□□□ 1.93
PABPN1-206ENST00000556809 FKTNO75072 461 aa27.09■■□□□ 1.93
PABPN1-206ENST00000556809 HLA-DOAP06340 250 aa27.09■■□□□ 1.93
PABPN1-206ENST00000556809 EVI5LQ96CN4 794 aa27.09■■□□□ 1.93
PABPN1-206ENST00000556809 MCOLN1Q9GZU1 580 aa27.09■■□□□ 1.93
PABPN1-206ENST00000556809 EHD4Q9H223 541 aa27.09■■□□□ 1.93
PABPN1-206ENST00000556809 A0A0G2JLL6 359 aaPredicted RBP27.08■■□□□ 1.93
PABPN1-206ENST00000556809 SLC4A8Q2Y0W8 1093 aa27.08■■□□□ 1.93
PABPN1-206ENST00000556809 LRRFIP1Q32MZ4 808 aaKnown RBP27.08■■□□□ 1.93
PABPN1-206ENST00000556809 PRRT2Q7Z6L0 340 aaPredicted RBP27.08■■□□□ 1.93
PABPN1-206ENST00000556809 ANKRD23Q86SG2 305 aa27.08■■□□□ 1.93
PABPN1-206ENST00000556809 CCDC84Q86UT8 332 aaPredicted RBP27.08■■□□□ 1.93
PABPN1-206ENST00000556809 SDR42E1Q8WUS8 393 aa27.08■■□□□ 1.93
PABPN1-206ENST00000556809 DCP1AQ9NPI6 582 aaPredicted RBP27.08■■□□□ 1.93
PABPN1-206ENST00000556809 MBD4O95243 580 aa27.07■■□□□ 1.92
PABPN1-206ENST00000556809 ZFYP08048 801 aaPredicted RBP27.07■■□□□ 1.92
PABPN1-206ENST00000556809 JAG1P78504 1218 aa27.07■■□□□ 1.92
PABPN1-206ENST00000556809 DGKZQ13574 1117 aa27.07■■□□□ 1.92
PABPN1-206ENST00000556809 TAF1CQ15572 869 aaPredicted RBP27.07■■□□□ 1.92
PABPN1-206ENST00000556809 CRACR2BQ8N4Y2 399 aaPredicted RBP27.07■■□□□ 1.92
PABPN1-206ENST00000556809 PUS7LQ9H0K6 701 aaKnown RBP27.07■■□□□ 1.92
PABPN1-206ENST00000556809 RNF113AO15541 343 aaKnown RBP27.06■■□□□ 1.92
PABPN1-206ENST00000556809 PLCD1P51178 756 aa27.06■■□□□ 1.92
PABPN1-206ENST00000556809 GPAT2Q6NUI2 795 aa27.06■■□□□ 1.92
PABPN1-206ENST00000556809 TATDN1Q6P1N9 297 aa27.06■■□□□ 1.92
PABPN1-206ENST00000556809 CTU1Q7Z7A3 348 aaKnown RBP27.06■■□□□ 1.92
PABPN1-206ENST00000556809 TTC6Q86TZ1 520 aa27.06■■□□□ 1.92
PABPN1-206ENST00000556809 ZFYVE28Q9HCC9 887 aa27.06■■□□□ 1.92
PABPN1-206ENST00000556809 TRIM6-TRIM34B2RNG4 842 aa27.05■■□□□ 1.92
PABPN1-206ENST00000556809 PRKAB2O43741 272 aa27.05■■□□□ 1.92
PABPN1-206ENST00000556809 ABHD8Q96I13 439 aa27.05■■□□□ 1.92
PABPN1-206ENST00000556809 SERPINB13Q9UIV8 391 aa27.05■■□□□ 1.92
PABPN1-206ENST00000556809 BAZ2AQ9UIF9 1905 aaKnown RBP27.04■■□□□ 1.92
PABPN1-206ENST00000556809 SHROOM1Q2M3G4 852 aaPredicted RBP27.04■■□□□ 1.92
PABPN1-206ENST00000556809 TRIM34Q9BYJ4 488 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms