RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MAST3O60307 1309 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 GNAQP50148 359 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 ZEB2O60315 1214 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 TBC1D8BQ0IIM8 1120 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 PIK3AP1Q6ZUJ8 805 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 VAV2P52735 878 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 LRRC27Q9C0I9 530 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 EXOC5O00471 708 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 MPHOSPH10O00566 681 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 PRPF4BQ13523 1007 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 PUM3Q15397 648 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 DZIP3Q86Y13 1208 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 JAKMIP2Q96AA8 810 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 IL25Q9H293 177 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 IL2RBP14784 551 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 TERF2Q15554 542 aa16.93■□□□□ 0.3
ARHGEF40-207ENST00000556399 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 BTBD18B2RXH4 712 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 RABGGTAQ92696 567 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 NAPAP54920 295 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 IFT81Q8WYA0 676 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 TSGA10Q9BZW7 698 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 GOLPH3LQ9H4A5 285 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 LMTK2Q8IWU2 1503 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 CALRP27797 417 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 MAP2K1Q02750 393 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 SPAG5Q96R06 1193 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 CCDC51Q96ER9 411 aa16.92■□□□□ 0.3
ARHGEF40-207ENST00000556399 hCG_1642624A0A1W2PR95 340 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 M0R2C6 588 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 BAG3O95817 575 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 ARID5AQ03989 594 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 OTUD6BQ8N6M0 293 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 FERMT2Q96AC1 680 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 PPP6R2O75170 966 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 PHKG2P15735 406 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 IFI16Q16666 785 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 TRIML1Q8N9V2 468 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 CRB1P82279 1406 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 ATP8B1O43520 1251 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 ATP2C2O75185 946 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 AKNAD1Q5T1N1 836 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 WHAMMP3Q1A5X7 153 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 NELFBQ8WX92 580 aa16.91■□□□□ 0.3
ARHGEF40-207ENST00000556399 GOLGA6CA6NDK9 693 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 PRDM1O75626 825 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 GOLGA6DP0CG33 693 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 PLCD1P51178 756 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 GOLGA6AQ9NYA3 693 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 SPTY2D1Q68D10 685 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 PLCD4Q9BRC7 762 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 NEFHP12036 1026 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
ARHGEF40-207ENST00000556399 CFAP58Q5T655 872 aa16.89■□□□□ 0.3
ARHGEF40-207ENST00000556399 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.3
ARHGEF40-207ENST00000556399 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.3
ARHGEF40-207ENST00000556399 ARHGEF40Q8TER5 1519 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 GDAP1L1Q96MZ0 367 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 GPR108Q9NPR9 543 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 PTPRMP28827 1452 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 VSTM4Q8IW00 320 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 PDE11AQ9HCR9 933 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 SPATA5Q8NB90 893 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 NRXN1Q9ULB1 1477 aa16.89■□□□□ 0.29
ARHGEF40-207ENST00000556399 LDHCP07864 332 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 LPIN2Q92539 896 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 GOLGA6BA6NDN3 693 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 ADORA1P30542 326 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 PDE4DQ08499 809 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 SPATA1Q5VX52 437 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 SRGAP1Q7Z6B7 1085 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 SELENOOQ9BVL4 669 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms