RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 DYNLL1P63167 89 aaKnown RBP15.83■□□□□ 0.12
SHMT2-211ENST00000554310 SLC9C2Q5TAH2 1124 aa15.83■□□□□ 0.12
SHMT2-211ENST00000554310 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.83■□□□□ 0.121e-6■■□□□ 11.9
SHMT2-211ENST00000554310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.83■□□□□ 0.12
SHMT2-211ENST00000554310 FKTNO75072 461 aa15.82■□□□□ 0.12
SHMT2-211ENST00000554310 CRHR2Q13324 411 aa15.82■□□□□ 0.12
SHMT2-211ENST00000554310 HDAC1Q13547 482 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-211ENST00000554310 DGKZQ13574 1117 aa15.82■□□□□ 0.12
SHMT2-211ENST00000554310 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
SHMT2-211ENST00000554310 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
SHMT2-211ENST00000554310 MCOLN1Q9GZU1 580 aa15.82■□□□□ 0.12
SHMT2-211ENST00000554310 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
SHMT2-211ENST00000554310 MAGEB6P1A0A0J9YX57 407 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 TCRBV5S4A2TA0A5A2 114 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 FAM196BA6NMK8 535 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 CXCL11O14625 94 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 HLA-DOAP06340 250 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 PTPRAP18433 802 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 IRX6P78412 446 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-211ENST00000554310 TAF1CQ15572 869 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-211ENST00000554310 EDC3Q96F86 508 aaKnown RBP15.81■□□□□ 0.12
SHMT2-211ENST00000554310 ABHD8Q96I13 439 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 R3HDMLQ9H3Y0 253 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 ZNF532Q9HCE3 1301 aa15.81■□□□□ 0.12
SHMT2-211ENST00000554310 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 SLURP2P0DP57 97 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 ADD2P35612 726 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 USP5P45974 858 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
SHMT2-211ENST00000554310 FAM43AQ8N2R8 423 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 CRNKL1Q9BZJ0 848 aaKnown RBP15.8■□□□□ 0.12
SHMT2-211ENST00000554310 ZFYVE28Q9HCC9 887 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 PALD1Q9ULE6 856 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 LOC285556D6RIA3 1793 aa15.8■□□□□ 0.12
SHMT2-211ENST00000554310 BTBD19C9JJ37 291 aa15.79■□□□□ 0.12
SHMT2-211ENST00000554310 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
SHMT2-211ENST00000554310 ANKRD23Q86SG2 305 aa15.79■□□□□ 0.12
SHMT2-211ENST00000554310 FOXP4Q8IVH2 680 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-211ENST00000554310 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-211ENST00000554310 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
SHMT2-211ENST00000554310 TBC1D2Q9BYX2 928 aa15.79■□□□□ 0.12
SHMT2-211ENST00000554310 SAP30BPQ9UHR5 308 aaKnown RBP15.79■□□□□ 0.12
SHMT2-211ENST00000554310 ZHX2Q9Y6X8 837 aa15.79■□□□□ 0.12
SHMT2-211ENST00000554310 A0A0G2JLL6 359 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-211ENST00000554310 ERC2O15083 957 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 CAP2P40123 477 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 UBE3CQ15386 1083 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 PKN2Q16513 984 aaKnown RBP15.78■□□□□ 0.12
SHMT2-211ENST00000554310 PRRT2Q7Z6L0 340 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-211ENST00000554310 ERO1AQ96HE7 468 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 EHD4Q9H223 541 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 DNAJC18Q9H819 358 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-211ENST00000554310 AFG3L2Q9Y4W6 797 aa15.78■□□□□ 0.12
SHMT2-211ENST00000554310 MOGSQ13724 837 aa15.77■□□□□ 0.12
SHMT2-211ENST00000554310 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.12
SHMT2-211ENST00000554310 TTC6Q86TZ1 520 aa15.77■□□□□ 0.12
SHMT2-211ENST00000554310 LCORLQ8N3X6 602 aa15.77■□□□□ 0.12
SHMT2-211ENST00000554310 GINM1Q9NU53 330 aa15.77■□□□□ 0.12
SHMT2-211ENST00000554310 TLR2O60603 784 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 ASNSP08243 561 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 MX1P20591 662 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 TSHZ3Q63HK5 1081 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 KBTBD3Q8NAB2 608 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 AS3MTQ9HBK9 375 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-211ENST00000554310 SERPINB13Q9UIV8 391 aa15.76■□□□□ 0.11
SHMT2-211ENST00000554310 MYH8P13535 1937 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 TRIM75PA6NK02 468 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 USP17L5A8MUK1 530 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 PDHXO00330 501 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 GLRX3O76003 335 aaKnown RBP15.75■□□□□ 0.11
SHMT2-211ENST00000554310 MBD4O95243 580 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 SP3Q02447 781 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 RRP1BQ14684 758 aaKnown RBP15.75■□□□□ 0.11
SHMT2-211ENST00000554310 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
SHMT2-211ENST00000554310 ARMT1Q9H993 441 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 SLC45A1Q9Y2W3 748 aa15.75■□□□□ 0.11
SHMT2-211ENST00000554310 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 SALL3Q9BXA9 1300 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 ZFYP08048 801 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 SLC4A8Q2Y0W8 1093 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 LRRFIP1Q32MZ4 808 aaKnown RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 ANKRD45Q5TZF3 282 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 CCDC84Q86UT8 332 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 ZNF280CQ8ND82 737 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 PI4K2BQ8TCG2 481 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 OTUD7AQ8TE49 926 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 SDR42E1Q8WUS8 393 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 DCP1AQ9NPI6 582 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-211ENST00000554310 MCM9Q9NXL9 1143 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 ZBTB21Q9ULJ3 1066 aa15.74■□□□□ 0.11
SHMT2-211ENST00000554310 ADGRA2Q96PE1 1338 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 POLR3DP05423 398 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-211ENST00000554310 GPAT2Q6NUI2 795 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 FBXO46Q6PJ61 603 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms