RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RUFY4Q6ZNE9 571 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 AGGF1Q8N302 714 aaeCLIP7.92□□□□□ -1.14
SYNE2-210ENST00000553455 ZSCAN1Q8NBB4 408 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 FANCD2OSQ96PS1 177 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 CRBNQ96SW2 442 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 WNT10AQ9GZT5 417 aa7.92□□□□□ -1.14
SYNE2-210ENST00000553455 NOP53Q9NZM5 478 aaKnown RBP7.92□□□□□ -1.14
SYNE2-210ENST00000553455 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-210ENST00000553455 NEFMP07197 916 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 PLCG1P19174 1290 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 PDE4BQ07343 736 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 PRRT3Q5FWE3 981 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 NUTM2GQ5VZR2 741 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 OVOS1Q6IE37 1185 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 GIMAP6Q6P9H5 292 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 TMEM130Q8N3G9 435 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 TMEM40Q8WWA1 233 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 TNKS2Q9H2K2 1166 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 GSX1Q9H4S2 264 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-210ENST00000553455 ADAM30Q9UKF2 790 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 ADAMTS8Q9UP79 889 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 AP4E1Q9UPM8 1137 aa7.91□□□□□ -1.14
SYNE2-210ENST00000553455 SLC22A31A6NKX4 558 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 FANCGO15287 622 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 PGRP06401 933 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 DRD2P14416 443 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 COL8A1P27658 744 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 SOX4Q06945 474 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-210ENST00000553455 RNF214Q8ND24 703 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 ACSF2Q96CM8 615 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-210ENST00000553455 ZSWIM4Q9H7M6 989 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 CYP4F12Q9HCS2 524 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 GMIPQ9P107 970 aa7.9□□□□□ -1.14
SYNE2-210ENST00000553455 SPATA31C1P0DKV0 1188 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 CASP7P55210 303 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 ETF1P62495 437 aaKnown RBP7.89□□□□□ -1.15
SYNE2-210ENST00000553455 LRRFIP1Q32MZ4 808 aaKnown RBP7.89□□□□□ -1.15
SYNE2-210ENST00000553455 Q6ZS46 218 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 PODNQ7Z5L7 613 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 UBE3DQ7Z6J8 389 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 CELF2-AS1Q8N7Q2 184 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-210ENST00000553455 C19orf47Q8N9M1 422 aaKnown RBP7.89□□□□□ -1.15
SYNE2-210ENST00000553455 C2CD4AQ8NCU7 369 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-210ENST00000553455 ATG4CQ96DT6 458 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 ATXN3LQ9H3M9 355 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 FBRSQ9HAH7 460 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 ACTR10Q9NZ32 417 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 TJP2Q9UDY2 1190 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 ACTL7BQ9Y614 415 aa7.89□□□□□ -1.15
SYNE2-210ENST00000553455 ALX3O95076 343 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 ACRP10323 421 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 TTLL4Q14679 1199 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 BMS1Q14692 1282 aaKnown RBP7.88□□□□□ -1.15
SYNE2-210ENST00000553455 ANKRD34AQ69YU3 496 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 NOP9Q86U38 636 aaKnown RBP7.88□□□□□ -1.15
SYNE2-210ENST00000553455 TAB3Q8N5C8 712 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-210ENST00000553455 LENG1Q96BZ8 264 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-210ENST00000553455 TM9SF2Q99805 663 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 TRIM55Q9BYV6 548 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 CNNM2Q9H8M5 875 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 SIRPGQ9P1W8 387 aa7.88□□□□□ -1.15
SYNE2-210ENST00000553455 A0A1W2PQH9 124 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 CHURC1-FNTBB4DL54 471 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 K7ELQ4 463 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-210ENST00000553455 HCLS1P14317 486 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-210ENST00000553455 NME1P15531 152 aaKnown RBP7.87□□□□□ -1.15
SYNE2-210ENST00000553455 GUCY2CP25092 1073 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 PREPP48147 710 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 NKG7Q16617 165 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 CDCP2Q5VXM1 449 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 FDX2Q6P4F2 183 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 NLRC3Q7RTR2 1065 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 TTC6Q86TZ1 520 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 C12orf50Q8NA57 414 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-210ENST00000553455 MKL1Q969V6 931 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 AKTIPQ9H8T0 292 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 PICK1Q9NRD5 415 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 FAM105AQ9NUU6 356 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 KLHL3Q9UH77 587 aa7.87□□□□□ -1.15
SYNE2-210ENST00000553455 CDK11AQ9UQ88 783 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-210ENST00000553455 UPK3BL1B0FP48 263 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 UPK3BL2E5RIL1 263 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 TNFRSF10CO14798 259 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 MLECQ14165 292 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 RASA3Q14644 834 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 ZYXQ15942 572 aaKnown RBP7.86□□□□□ -1.15
SYNE2-210ENST00000553455 ARSHQ5FYA8 562 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 DYMQ7RTS9 669 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 MCATQ8IVS2 390 aaKnown RBP7.86□□□□□ -1.15
SYNE2-210ENST00000553455 MRPL41Q8IXM3 137 aaKnown RBP7.86□□□□□ -1.15
SYNE2-210ENST00000553455 MICAL1Q8TDZ2 1067 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 ISL2Q96A47 359 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 TMEM87BQ96K49 555 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 MSRB2Q9Y3D2 182 aa7.86□□□□□ -1.15
SYNE2-210ENST00000553455 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
SYNE2-210ENST00000553455 SMARCA5O60264 1052 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-210ENST00000553455 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.15
SYNE2-210ENST00000553455 DDR2Q16832 855 aa7.85□□□□□ -1.15
SYNE2-210ENST00000553455 HID1Q8IV36 788 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms