RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 H3BRJ5 948 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 TRIM37O94972 964 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 CYP11A1P05108 521 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 HNRNPUQ00839 825 aaKnown RBP eCLIP7.58□□□□□ -1.2
CPSF6-206ENST00000550987 TCEAL1Q15170 157 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 FXNQ16595 210 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 SCARA3Q6AZY7 606 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 LRP10Q7Z4F1 713 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 NLGN1Q8N2Q7 840 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
CPSF6-206ENST00000550987 TTC9Q92623 222 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 CORO1BQ9BR76 489 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 KLF15Q9UIH9 416 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 PCDHA4Q9UN74 947 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 PPME1Q9Y570 386 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 CDK13Q14004 1512 aaKnown RBP7.57□□□□□ -1.2
CPSF6-206ENST00000550987 EPHA1P21709 976 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 MEX3CQ5U5Q3 659 aaKnown RBP7.57□□□□□ -1.2
CPSF6-206ENST00000550987 ADAMTSL4Q6UY14 1074 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 JPH1Q9HDC5 661 aaPredicted RBP7.57□□□□□ -1.2
CPSF6-206ENST00000550987 GGA1Q9UJY5 639 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 ZNRF3Q9ULT6 936 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 FHAD1B1AJZ9 1412 aa7.57□□□□□ -1.2
CPSF6-206ENST00000550987 RAPGEF2Q9Y4G8 1499 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 SYNMO15061 1565 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 FAM221BA6H8Z2 402 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 LINC01387J3KSC0 135 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 HSPA6P17066 643 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 PTPN11Q06124 597 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-206ENST00000550987 ZNF252P-AS1Q0IIN9 211 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 C19orf57Q0VDD7 668 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 POU4F3Q15319 338 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 LRRFIP1Q32MZ4 808 aaKnown RBP7.56□□□□□ -1.2
CPSF6-206ENST00000550987 RNF187Q5TA31 235 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-206ENST00000550987 MPRIPQ6WCQ1 1025 aa7.56□□□□□ -1.2
CPSF6-206ENST00000550987 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-206ENST00000550987 ZNF142P52746 1687 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-206ENST00000550987 TRAPPC8Q9Y2L5 1435 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 ROBO1Q9Y6N7 1651 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 DDAH1O94760 285 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 IBSPP21815 317 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-206ENST00000550987 DDR2Q16832 855 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 TXNDC11Q6PKC3 985 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 HDXQ7Z353 690 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 CELF2-AS1Q8N7Q2 184 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 GAL3ST3Q96A11 431 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 DNAJC7Q99615 494 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 SLKQ9H2G2 1235 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-206ENST00000550987 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-206ENST00000550987 EHMT1Q9H9B1 1298 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 MBIPQ9NS73 344 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 PHLDB1Q86UU1 1377 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 RICTORQ6R327 1708 aa7.55□□□□□ -1.2
CPSF6-206ENST00000550987 TTBK1Q5TCY1 1321 aaPredicted RBP7.54□□□□□ -1.2
CPSF6-206ENST00000550987 PDE3AQ14432 1141 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
CPSF6-206ENST00000550987 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 GPBAR1Q8TDU6 330 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 ELMO3Q96BJ8 720 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 RNPC3Q96LT9 517 aaKnown RBP7.54□□□□□ -1.2
CPSF6-206ENST00000550987 JCADQ9P266 1359 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 ABCA8O94911 1581 aa7.54□□□□□ -1.2
CPSF6-206ENST00000550987 FAM135BQ49AJ0 1406 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 ZFYVE16Q7Z3T8 1539 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 KIAA1210Q9ULL0 1709 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 PDPK1O15530 556 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 LILRB5O75023 590 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 MAOBP27338 520 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 RASA3Q14644 834 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 WIPI1Q5MNZ9 446 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-206ENST00000550987 HGSNATQ68CP4 663 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-206ENST00000550987 WFDC8Q8IUA0 241 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 GOLGA6L1Q8N7Z2 621 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 RBBP8NLQ8NC74 664 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-206ENST00000550987 WNT8BQ93098 351 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 GDF2Q9UK05 429 aaPredicted RBP7.53□□□□□ -1.2
CPSF6-206ENST00000550987 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 SNCAIPQ9Y6H5 919 aa7.53□□□□□ -1.2
CPSF6-206ENST00000550987 POLR1AO95602 1720 aaPredicted RBP7.52□□□□□ -1.2
CPSF6-206ENST00000550987 STRCP1A6NGW2 1772 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 IGF1RP08069 1367 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 FSCN2O14926 492 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 PPP1R12AO14974 1030 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-206ENST00000550987 ATE1O95260 518 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 CASP7P55210 303 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 GAS6Q14393 721 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 RUFY4Q6ZNE9 571 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 OSGEPQ9NPF4 335 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 PICK1Q9NRD5 415 aa7.52□□□□□ -1.21
CPSF6-206ENST00000550987 POLR3KQ9Y2Y1 108 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-206ENST00000550987 PHLPP1O60346 1717 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms