RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 USP5P45974 858 aa20.87■□□□□ 0.93
CHMP1A-208ENST00000550102 HDAC1Q13547 482 aaPredicted RBP20.87■□□□□ 0.93
CHMP1A-208ENST00000550102 LOC285556D6RIA3 1793 aa20.87■□□□□ 0.93
CHMP1A-208ENST00000550102 TCRBV5S4A2TA0A5A2 114 aa20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 GPR25O00155 361 aa20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 HLA-DOAP06340 250 aa20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 ZNF296Q8WUU4 475 aaPredicted RBP20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 RIOK1Q9BRS2 568 aaKnown RBP20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 TRIM34Q9BYJ4 488 aa20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 ZBTB47Q9UFB7 747 aaPredicted RBP20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 SAP30BPQ9UHR5 308 aaKnown RBP20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 KCNH4Q9UQ05 1017 aa20.86■□□□□ 0.93
CHMP1A-208ENST00000550102 CAPN15O75808 1086 aa20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 PTPRAP18433 802 aa20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 ADD2P35612 726 aa20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 CRHR2Q13324 411 aa20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 CRACR2BQ8N4Y2 399 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 CRNKL1Q9BZJ0 848 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 R3HDMLQ9H3Y0 253 aa20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 ZCCHC17Q9NP64 241 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 PALD1Q9ULE6 856 aa20.85■□□□□ 0.93
CHMP1A-208ENST00000550102 TTC41PQ6P2S7 1318 aa20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 DGKZQ13574 1117 aa20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 TAF1CQ15572 869 aaPredicted RBP20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 TSHZ3Q63HK5 1081 aa20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 FAM43AQ8N2R8 423 aa20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-208ENST00000550102 FKTNO75072 461 aa20.83■□□□□ 0.93
CHMP1A-208ENST00000550102 ZSCAN25Q6NSZ9 544 aa20.83■□□□□ 0.93
CHMP1A-208ENST00000550102 CTU1Q7Z7A3 348 aaKnown RBP20.83■□□□□ 0.93
CHMP1A-208ENST00000550102 MCOLN1Q9GZU1 580 aa20.83■□□□□ 0.93
CHMP1A-208ENST00000550102 ZHX2Q9Y6X8 837 aa20.83■□□□□ 0.93
CHMP1A-208ENST00000550102 BTBD19C9JJ37 291 aa20.82■□□□□ 0.92
CHMP1A-208ENST00000550102 CXCL11O14625 94 aa20.82■□□□□ 0.92
CHMP1A-208ENST00000550102 ERC2O15083 957 aa20.82■□□□□ 0.92
CHMP1A-208ENST00000550102 METTL16Q86W50 562 aaKnown RBP20.82■□□□□ 0.92
CHMP1A-208ENST00000550102 EXOC6Q8TAG9 804 aa20.82■□□□□ 0.92
CHMP1A-208ENST00000550102 MX1P20591 662 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 CAP2P40123 477 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 UBE3CQ15386 1083 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 SLC4A8Q2Y0W8 1093 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 FOXP4Q8IVH2 680 aaPredicted RBP20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 LCORLQ8N3X6 602 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 ABHD8Q96I13 439 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 DNAJC18Q9H819 358 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 ZFYVE28Q9HCC9 887 aa20.81■□□□□ 0.92
CHMP1A-208ENST00000550102 GLRX3O76003 335 aaKnown RBP20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 MBD4O95243 580 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 ANKRD45Q5TZF3 282 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 ANKRD23Q86SG2 305 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 OTUD7AQ8TE49 926 aaPredicted RBP20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 TBC1D2Q9BYX2 928 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 EHD4Q9H223 541 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 AFG3L2Q9Y4W6 797 aa20.8■□□□□ 0.92
CHMP1A-208ENST00000550102 A0A0G2JLL6 359 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 PRRT2Q7Z6L0 340 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 TTC6Q86TZ1 520 aa20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 RWDD1Q9H446 243 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 ARMT1Q9H993 441 aa20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
CHMP1A-208ENST00000550102 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 ASNSP08243 561 aa20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 MOGSQ13724 837 aa20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 SLFNL1Q499Z3 407 aa20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 CCDC84Q86UT8 332 aaPredicted RBP20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 PI4K2BQ8TCG2 481 aa20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 ZSWIM8A7E2V4 1837 aa20.78■□□□□ 0.92
CHMP1A-208ENST00000550102 PDHXO00330 501 aa20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 ZFYP08048 801 aaPredicted RBP20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 RRP1BQ14684 758 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 LRRFIP1Q32MZ4 808 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 FASTKD5Q7L8L6 764 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 SDR42E1Q8WUS8 393 aa20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 ERO1AQ96HE7 468 aa20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 GINM1Q9NU53 330 aa20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 MCM9Q9NXL9 1143 aa20.77■□□□□ 0.92
CHMP1A-208ENST00000550102 MGAMO43451 1857 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 USP17L5A8MUK1 530 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 CHGBP05060 677 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 POLR3DP05423 398 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 PKN2Q16513 984 aaKnown RBP20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 GADL1Q6ZQY3 521 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 SMC5Q8IY18 1101 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 ZNF280CQ8ND82 737 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 AS3MTQ9HBK9 375 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 DCP1AQ9NPI6 582 aaPredicted RBP20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 ATP8A2Q9NTI2 1148 aa20.76■□□□□ 0.91
CHMP1A-208ENST00000550102 TLR2O60603 784 aa20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 GDF11O95390 407 aa20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 SP3Q02447 781 aa20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 APPBP2Q92624 585 aa20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 DDRGK1Q96HY6 314 aa20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 PARK7Q99497 189 aaKnown RBP20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 ZBTB21Q9ULJ3 1066 aa20.75■□□□□ 0.91
CHMP1A-208ENST00000550102 SPP2Q13103 211 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms