RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 ARIH1Q9Y4X5 557 aaPredicted RBP8.66□□□□□ -1.02
LIN7A-202ENST00000549417 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
LIN7A-202ENST00000549417 MUC6Q6W4X9 2439 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 TRIM43BA6NCK2 446 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 C19orf67A6NJJ6 358 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 IGFBP4P22692 258 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 EPHB4P54760 987 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 TFF2Q03403 129 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 CDC42EP5Q6NZY7 148 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 LDHAL6AQ6ZMR3 332 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 C8orf58Q8NAV2 365 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 TRIM43Q96BQ3 446 aaPredicted RBP8.65□□□□□ -1.02
LIN7A-202ENST00000549417 TIFAQ96CG3 184 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 PRDM12Q9H4Q4 367 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
LIN7A-202ENST00000549417 CNGA1P29973 690 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 MRE11P49959 708 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 FOXO4P98177 505 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 TRIM60Q495X7 471 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 GJC2Q5T442 439 aaPredicted RBP8.64□□□□□ -1.03
LIN7A-202ENST00000549417 G2E3Q7L622 706 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 PDLIM7Q9NR12 457 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 LRRFIP2Q9Y608 721 aaKnown RBP8.64□□□□□ -1.03
LIN7A-202ENST00000549417 DOCK1Q14185 1865 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 DOCK2Q92608 1830 aa8.64□□□□□ -1.03
LIN7A-202ENST00000549417 RLFQ13129 1914 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 BMP1P13497 986 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 ITGB8P26012 769 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 PBX2P40425 430 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 GCLCP48506 637 aaPredicted RBP8.63□□□□□ -1.03
LIN7A-202ENST00000549417 KCNQ1P51787 676 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 HMGCS2P54868 508 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 EVX2Q03828 476 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 UBE4AQ14139 1066 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 ADGRE1Q14246 886 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 CCDC57Q2TAC2 916 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 CCDC30Q5VVM6 783 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 LMBR1LQ6UX01 489 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 SLC39A5Q6ZMH5 540 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 ZSCAN29Q8IWY8 852 aaPredicted RBP8.63□□□□□ -1.03
LIN7A-202ENST00000549417 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 TBC1D22AQ8WUA7 517 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 PUS3Q9BZE2 481 aaKnown RBP8.63□□□□□ -1.03
LIN7A-202ENST00000549417 ASCC2Q9H1I8 757 aaPredicted RBP8.63□□□□□ -1.03
LIN7A-202ENST00000549417 DAGLAQ9Y4D2 1042 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 PLXNA1Q9UIW2 1896 aa8.63□□□□□ -1.03
LIN7A-202ENST00000549417 ATRNL1Q5VV63 1379 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 GRXCR1A8MXD5 290 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 XRCC5P13010 732 aaKnown RBP8.62□□□□□ -1.03
LIN7A-202ENST00000549417 SPP2Q13103 211 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 EPHA10Q5JZY3 1008 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 AKNAD1Q5T1N1 836 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 ANO1Q5XXA6 986 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 HHIPL2Q6UWX4 724 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 FBXO33Q7Z6M2 555 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 TSPYL6Q8N831 410 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 FERMT2Q96AC1 680 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 TXNRD2Q9NNW7 524 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 USP40Q9NVE5 1235 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 FLRT1Q9NZU1 646 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 NDUFB9Q9Y6M9 179 aa8.62□□□□□ -1.03
LIN7A-202ENST00000549417 LOC285556D6RIA3 1793 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 MAST3O60307 1309 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 DNM1LO00429 736 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 RGS2P41220 211 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 RGS3P49796 1198 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 CCDC129Q6ZRS4 1044 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 SH3BP5LQ7L8J4 393 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 CCAR1Q8IX12 1150 aaKnown RBP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 KHSRPQ92945 711 aaKnown RBP eCLIP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 MRIQ9BWK5 157 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 PORCNQ9H237 461 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
LIN7A-202ENST00000549417 DDX20Q9UHI6 824 aaKnown RBP8.61□□□□□ -1.03
LIN7A-202ENST00000549417 USP34Q70CQ2 3546 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 CLSPNQ9HAW4 1339 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 DDTLA6NHG4 134 aaPredicted RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 CTNND1O60716 968 aaKnown RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 ZNF853P0CG23 659 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 IRX3P78415 501 aaPredicted RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 PABPC4Q13310 644 aaKnown RBP eCLIP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 Q3C1V9 767 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 CAVIN4Q5BKX8 364 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 MORN1Q5T089 497 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 TRPV1Q8NER1 839 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 GPRC5AQ8NFJ5 357 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 LPAR1Q92633 364 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 USP6NLQ92738 828 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 P2RX7Q99572 595 aaKnown RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 APBA2Q99767 749 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms