RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 LIG3P49916 1009 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 FANCCQ00597 558 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 PWP1Q13610 501 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 CYP27C1Q4G0S4 372 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 ZBTB37Q5TC79 503 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 KCT2Q8NC54 265 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 SNCAIPQ9Y6H5 919 aa8.43□□□□□ -1.06
USP15-213ENST00000549268 PRNPP04156 253 aa8.42□□□□□ -1.06
USP15-213ENST00000549268 HDLBPQ00341 1268 aaKnown RBP8.42□□□□□ -1.06
USP15-213ENST00000549268 PTPN11Q06124 597 aaPredicted RBP8.42□□□□□ -1.06
USP15-213ENST00000549268 PPM1JQ5JR12 505 aa8.42□□□□□ -1.06
USP15-213ENST00000549268 CYFIP1Q7L576 1253 aa8.42□□□□□ -1.06
USP15-213ENST00000549268 HDXQ7Z353 690 aa8.42□□□□□ -1.06
USP15-213ENST00000549268 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP15-213ENST00000549268 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
USP15-213ENST00000549268 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
USP15-213ENST00000549268 DCDC2CA8MYV0 355 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
USP15-213ENST00000549268 CDK5R2Q13319 367 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 INPP5AQ14642 412 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 USP48Q86UV5 1035 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 C12orf40Q86WS4 652 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 NT5DC4Q86YG4 428 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 ELMO3Q96BJ8 720 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 RSRP1Q9BUV0 290 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 SSU72Q9NP77 194 aaKnown RBP8.41□□□□□ -1.06
USP15-213ENST00000549268 COPRSQ9NQ92 184 aa8.41□□□□□ -1.06
USP15-213ENST00000549268 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
USP15-213ENST00000549268 LRFN4Q6PJG9 635 aa8.4□□□□□ -1.06
USP15-213ENST00000549268 CCDC84Q86UT8 332 aaPredicted RBP8.4□□□□□ -1.06
USP15-213ENST00000549268 KBTBD4Q9NVX7 518 aa8.4□□□□□ -1.06
USP15-213ENST00000549268 TLR6Q9Y2C9 796 aa8.4□□□□□ -1.06
USP15-213ENST00000549268 CSADQ9Y600 493 aa8.4□□□□□ -1.06
USP15-213ENST00000549268 WNT11O96014 354 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 PLPPR2Q96GM1 343 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 TMEM74Q96NL1 305 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 DUSP23Q9BVJ7 150 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 MIR1-1HGQ9H1L0 117 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 MKNK2Q9HBH9 465 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 PICK1Q9NRD5 415 aa8.39□□□□□ -1.07
USP15-213ENST00000549268 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
USP15-213ENST00000549268 CAP2P40123 477 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 ZNF394Q53GI3 561 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 PHC3Q8NDX5 983 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 JARID2Q92833 1246 aaPredicted RBP8.38□□□□□ -1.07
USP15-213ENST00000549268 WNT10AQ9GZT5 417 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 PCDHGB7Q9Y5F8 929 aa8.38□□□□□ -1.07
USP15-213ENST00000549268 GFRA2O00451 464 aa8.37□□□□□ -1.07
USP15-213ENST00000549268 ADAMTS4O75173 837 aa8.37□□□□□ -1.07
USP15-213ENST00000549268 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
USP15-213ENST00000549268 FAM160A1Q05DH4 1040 aa8.37□□□□□ -1.07
USP15-213ENST00000549268 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.37□□□□□ -1.07
USP15-213ENST00000549268 ERMP1Q7Z2K6 904 aa8.37□□□□□ -1.07
USP15-213ENST00000549268 METTL16Q86W50 562 aaKnown RBP8.37□□□□□ -1.07
USP15-213ENST00000549268 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
USP15-213ENST00000549268 PF4P02776 101 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 GP2P55259 537 aaKnown RBP8.36□□□□□ -1.07
USP15-213ENST00000549268 SEPT6Q14141 434 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 WIPI1Q5MNZ9 446 aaPredicted RBP8.36□□□□□ -1.07
USP15-213ENST00000549268 SNAP47Q5SQN1 464 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 VSIG10LQ86VR7 867 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 ZNF654Q8IZM8 581 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 CCSER2Q9H7U1 834 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 LRRC4CQ9HCJ2 640 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 CCDC39Q9UFE4 941 aa8.36□□□□□ -1.07
USP15-213ENST00000549268 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.36□□□□□ -1.07
USP15-213ENST00000549268 LEFTY1O75610 366 aa8.35□□□□□ -1.07
USP15-213ENST00000549268 LRIG2O94898 1065 aa8.35□□□□□ -1.07
USP15-213ENST00000549268 EIF4A3P38919 411 aaKnown RBP8.35□□□□□ -1.07
USP15-213ENST00000549268 CAMK2GQ13555 558 aaPredicted RBP8.35□□□□□ -1.07
USP15-213ENST00000549268 UBE3DQ7Z6J8 389 aa8.35□□□□□ -1.07
USP15-213ENST00000549268 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
USP15-213ENST00000549268 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 IGF2BP3O00425 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP15-213ENST00000549268 RPL6Q02878 288 aaKnown RBP8.34□□□□□ -1.07
USP15-213ENST00000549268 LMNB2Q03252 620 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 FAM214BQ7L5A3 538 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 HID1Q8IV36 788 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 TOP6BLQ8N6T0 577 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 GOLM1Q8NBJ4 401 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 FBXL18Q96ME1 805 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 SPON2Q9BUD6 331 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 IGSF5Q9NSI5 407 aa8.34□□□□□ -1.07
USP15-213ENST00000549268 DDX41Q9UJV9 622 aaKnown RBP8.34□□□□□ -1.07
USP15-213ENST00000549268 CDK8P49336 464 aa8.33□□□□□ -1.08
USP15-213ENST00000549268 SLBPQ14493 270 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP15-213ENST00000549268 ARMCX6Q7L4S7 300 aa8.33□□□□□ -1.08
USP15-213ENST00000549268 ZNF296Q8WUU4 475 aaPredicted RBP8.33□□□□□ -1.08
USP15-213ENST00000549268 MISP3Q96FF7 219 aa8.33□□□□□ -1.08
USP15-213ENST00000549268 TGIF2Q9GZN2 237 aa8.33□□□□□ -1.08
USP15-213ENST00000549268 ANGEL1Q9UNK9 670 aaKnown RBP8.33□□□□□ -1.08
USP15-213ENST00000549268 OAS3Q9Y6K5 1087 aaKnown RBP8.33□□□□□ -1.08
USP15-213ENST00000549268 OXCT1P55809 520 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 ETF1P62495 437 aaKnown RBP8.32□□□□□ -1.08
USP15-213ENST00000549268 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
USP15-213ENST00000549268 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms