RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 CNNM2Q9H8M5 875 aa11.17□□□□□ -0.62
DDX11-229ENST00000545668 ZBTB43O43298 467 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 CDKL5O76039 1030 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 RFC4P35249 363 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 AKNAD1Q5T1N1 836 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 OLFM4Q6UX06 510 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 UBXN4Q92575 508 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 DRC1Q96MC2 740 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 GOLPH3LQ9H4A5 285 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 LRP5O75197 1615 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 MYH7P12883 1935 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 GOLGA8FQ08AF8 430 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 GOLGA8DPQ0D2H9 430 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 SART3Q15020 963 aaKnown RBP11.16□□□□□ -0.62
DDX11-229ENST00000545668 APOA5Q6Q788 366 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 TDRD7Q8NHU6 1098 aaKnown RBP11.16□□□□□ -0.62
DDX11-229ENST00000545668 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
DDX11-229ENST00000545668 KRT23Q9C075 422 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 SLC12A7Q9Y666 1083 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 MAGEB6P1A0A0J9YX57 407 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 SPTLC2O15270 562 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 NDUFA8P51970 172 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 FBXO18Q8NFZ0 1043 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 MYL10Q9BUA6 226 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 XPO4Q9C0E2 1151 aaKnown RBP11.16□□□□□ -0.62
DDX11-229ENST00000545668 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 PCDHA7Q9UN72 937 aa11.16□□□□□ -0.62
DDX11-229ENST00000545668 ERICH2A1L162 156 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 DPCR1Q3MIW9 517 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 ATL3Q6DD88 541 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 CPLX3Q8WVH0 158 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 NOL10Q9BSC4 688 aaKnown RBP11.15□□□□□ -0.62
DDX11-229ENST00000545668 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 RCOR1Q9UKL0 485 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 CLIC4Q9Y696 253 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 LOC102724159A0A0B4J2E5 919 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 GOLGA8AA7E2F4 631 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 PWP2Q15269 919 aaKnown RBP11.15□□□□□ -0.62
DDX11-229ENST00000545668 ERCC6LQ2NKX8 1250 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 KRT222Q8N1A0 295 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 NEK11Q8NG66 645 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.62
DDX11-229ENST00000545668 ZKSCAN3Q9BRR0 538 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 SPATA31A6Q5VVP1 1343 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 PNPLA7Q6ZV29 1317 aa11.15□□□□□ -0.62
DDX11-229ENST00000545668 KLHL10Q6JEL2 608 aa11.15□□□□□ -0.63
DDX11-229ENST00000545668 GOLGA6L1Q8N7Z2 621 aa11.15□□□□□ -0.63
DDX11-229ENST00000545668 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.63
DDX11-229ENST00000545668 PHKBQ93100 1093 aa11.15□□□□□ -0.63
DDX11-229ENST00000545668 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.63
DDX11-229ENST00000545668 MYO5AQ9Y4I1 1855 aaKnown RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 ADGRA1Q86SQ6 560 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 NUP133Q8WUM0 1156 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 OGFRQ9NZT2 677 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 DDX60Q8IY21 1712 aaKnown RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 ZNF804BA4D1E1 1349 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 SLU7O95391 586 aaKnown RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 IARSP41252 1262 aaKnown RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 UBASH3AP57075 661 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 LY9Q9HBG7 655 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 RGL2O15211 777 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 CAVIN2O95810 425 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.14□□□□□ -0.63
DDX11-229ENST00000545668 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
DDX11-229ENST00000545668 RREB1Q92766 1687 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 ANKRD65E5RJM6 399 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 NEMFO60524 1076 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 CDC27P30260 824 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 HIBADHP31937 336 aaKnown RBP11.13□□□□□ -0.63
DDX11-229ENST00000545668 SYKP43405 635 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 PPARAQ07869 468 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 EP400NLQ6ZTU2 488 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
DDX11-229ENST00000545668 AIFM3Q96NN9 605 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 UBAC1Q9BSL1 405 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
DDX11-229ENST00000545668 KLRK1P26718 216 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 LIFRP42702 1097 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 WTAPQ15007 396 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 FAM196AQ6ZSG2 479 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 AMIGO3Q86WK7 504 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 PLA2G4DQ86XP0 818 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 ZNF202O95125 648 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 GSDMDP57764 484 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 BRAPQ7Z569 592 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 CNNM3Q8NE01 707 aa11.13□□□□□ -0.63
DDX11-229ENST00000545668 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms