RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ENTPD3O75355 529 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 FGRP09769 529 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 CACNB3P54284 484 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 ANTXR2P58335 489 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 NFIAQ12857 509 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 MTA3Q9BTC8 594 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
SCARB1-209ENST00000545305 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 INCENPQ9NQS7 918 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 ZNF70Q9UC06 446 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-209ENST00000545305 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-209ENST00000545305 CLRN2A0PK11 232 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 PRDM1O75626 825 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 C16orf86Q6ZW13 317 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-209ENST00000545305 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 AGXT2Q9BYV1 514 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 FAM198AQ9UFP1 575 aa16.22■□□□□ 0.19
SCARB1-209ENST00000545305 CNOT7Q9UIV1 285 aaKnown RBP16.22■□□□□ 0.19
SCARB1-209ENST00000545305 SMIM22K7EJ46 135 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 SH2B2O14492 632 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-209ENST00000545305 IFIT3O14879 490 aaKnown RBP16.21■□□□□ 0.19
SCARB1-209ENST00000545305 PLCD1P51178 756 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 EVX2Q03828 476 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 TCP10Q12799 353 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 IQCA1Q86XH1 822 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 DYNLL2Q96FJ2 89 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 ZBED3Q96IU2 234 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-209ENST00000545305 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
SCARB1-209ENST00000545305 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 VEZTQ9HBM0 779 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 SWAP70Q9UH65 585 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 TPCN1Q9ULQ1 816 aa16.21■□□□□ 0.19
SCARB1-209ENST00000545305 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-209ENST00000545305 ANGEL1Q9UNK9 670 aaKnown RBP16.21■□□□□ 0.19
SCARB1-209ENST00000545305 ZC3H4Q9UPT8 1303 aaKnown RBP16.2■□□□□ 0.18
SCARB1-209ENST00000545305 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 TCP10L2B9ZVM9 353 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 LMOD1P29536 600 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-209ENST00000545305 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 CUL4AQ13619 759 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 KIF4BQ2VIQ3 1234 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
SCARB1-209ENST00000545305 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-209ENST00000545305 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 EHD4Q9H223 541 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 GPRC5DQ9NZD1 345 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 SERPINB13Q9UIV8 391 aa16.2■□□□□ 0.18
SCARB1-209ENST00000545305 ATRNL1Q5VV63 1379 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 WNT10BO00744 389 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 LARGE1O95461 756 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 TNNI2P48788 182 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 CDK8P49336 464 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 WTAPQ15007 396 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-209ENST00000545305 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 CRACR2BQ8N4Y2 399 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-209ENST00000545305 INTS4Q96HW7 963 aaKnown RBP16.19■□□□□ 0.18
SCARB1-209ENST00000545305 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-209ENST00000545305 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
SCARB1-209ENST00000545305 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 CCDC69A6NI79 296 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 TSPY3P0CV98 308 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 TSPY8P0CW00 308 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 LIFRP42702 1097 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 TNFAIP1Q13829 316 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 ME3Q16798 604 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 NBPF9Q3BBW0 867 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 CCDC83Q8IWF9 413 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 TMTC2Q8N394 836 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 SLC44A5Q8NCS7 719 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 FAM151AQ8WW52 585 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 ZNF274Q96GC6 653 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-209ENST00000545305 ZSCAN10Q96SZ4 725 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-209ENST00000545305 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 PI4KBQ9UBF8 816 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-209ENST00000545305 TNKSO95271 1327 aa16.18■□□□□ 0.18
SCARB1-209ENST00000545305 MYH8P13535 1937 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 RASA1P20936 1047 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 TFAP4Q01664 338 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 STK3Q13188 491 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 SAMD7Q7Z3H4 446 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 FAM83AQ86UY5 434 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms