RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ZNF384Q8TF68 577 aa14.64□□□□□ -0.07
GABPB1-206ENST00000543881 NEUROD6Q96NK8 337 aa14.64□□□□□ -0.07
GABPB1-206ENST00000543881 GDF15Q99988 308 aa14.64□□□□□ -0.07
GABPB1-206ENST00000543881 IDI2Q9BXS1 227 aa14.64□□□□□ -0.07
GABPB1-206ENST00000543881 ABCF2Q9UG63 623 aa14.64□□□□□ -0.07
GABPB1-206ENST00000543881 DOCK1Q14185 1865 aa14.64□□□□□ -0.07
GABPB1-206ENST00000543881 TRIM75PA6NK02 468 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 RLBP1P12271 317 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 BMP8BP34820 402 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 MAP3K10Q02779 954 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 SH3BP5LQ7L8J4 393 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 ZGPATQ8N5A5 531 aaKnown RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 FAM163AQ96GL9 167 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■■□□ 14.7
GABPB1-206ENST00000543881 HMG20BQ9P0W2 317 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 A0A0C4DFX4 3053 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 RFX7Q2KHR2 1363 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 DDTLA6NHG4 134 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 CTNND1O60716 968 aaKnown RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 SLURP2P0DP57 97 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 POLA2Q14181 598 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 DZIP1Q86YF9 867 aaKnown RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 C7orf61Q8IZ16 206 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 C1orf115Q9H7X2 142 aa14.63□□□□□ -0.07
GABPB1-206ENST00000543881 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-206ENST00000543881 ATP8B2P98198 1209 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 MECOMQ03112 1051 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
GABPB1-206ENST00000543881 FAM110CQ1W6H9 321 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 GPR153Q6NV75 609 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 TBC1D9Q6ZT07 1266 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 CCDC84Q86UT8 332 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-206ENST00000543881 ANKLE1Q8NAG6 615 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 SSH3Q8TE77 659 aa14.62□□□□□ -0.07
GABPB1-206ENST00000543881 DDX4Q9NQI0 724 aaKnown RBP14.62□□□□□ -0.07
GABPB1-206ENST00000543881 ZMYND8Q9ULU4 1186 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-206ENST00000543881 ARID4AP29374 1257 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-206ENST00000543881 BTDP43251 543 aa14.61□□□□□ -0.07
GABPB1-206ENST00000543881 TREML2Q5T2D2 321 aa14.61□□□□□ -0.07
GABPB1-206ENST00000543881 SPTY2D1Q68D10 685 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-206ENST00000543881 DEFB123Q8N688 67 aa14.61□□□□□ -0.07
GABPB1-206ENST00000543881 SPATA5Q8NB90 893 aa14.61□□□□□ -0.07
GABPB1-206ENST00000543881 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
GABPB1-206ENST00000543881 MROH7-TTC4A0A0A0MT08 1334 aa14.61□□□□□ -0.07
GABPB1-206ENST00000543881 HMGCRP04035 888 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 MCAMP43121 646 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 RHBDL3P58872 404 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 PICALMQ13492 652 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 Q7L0L9 218 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 ERICH6Q7L0X2 663 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
GABPB1-206ENST00000543881 GPR75-ASB3A0A0A6YYF3 556 aa14.59□□□□□ -0.07
GABPB1-206ENST00000543881 SYN1P17600 705 aa14.59□□□□□ -0.07
GABPB1-206ENST00000543881 LRIT3Q3SXY7 679 aa14.59□□□□□ -0.07
GABPB1-206ENST00000543881 ITPRIPQ8IWB1 547 aa14.59□□□□□ -0.07
GABPB1-206ENST00000543881 SLF2Q8IX21 1173 aa14.59□□□□□ -0.07
GABPB1-206ENST00000543881 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
GABPB1-206ENST00000543881 NSUN4Q96CB9 384 aaKnown RBP14.59□□□□□ -0.07
GABPB1-206ENST00000543881 HMX1Q9NP08 348 aaPredicted RBP14.59□□□□□ -0.07
GABPB1-206ENST00000543881 RPTORQ8N122 1335 aa14.59□□□□□ -0.07
GABPB1-206ENST00000543881 MAGEA10P43363 369 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-206ENST00000543881 GCLCP48506 637 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-206ENST00000543881 TRIM32Q13049 653 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 TNNI3KQ59H18 835 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 PROCA1Q8NCQ7 364 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-206ENST00000543881 DBNDD2Q9BQY9 259 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 GPR108Q9NPR9 543 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 STXBP5LQ9Y2K9 1186 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 FPGT-TNNI3KV9GXZ4 949 aa14.58□□□□□ -0.08
GABPB1-206ENST00000543881 DDX60LQ5H9U9 1706 aaKnown RBP14.58□□□□□ -0.08
GABPB1-206ENST00000543881 TBC1D12O60347 775 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 SURF6O75683 361 aaKnown RBP14.57□□□□□ -0.08
GABPB1-206ENST00000543881 SPP2Q13103 211 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 TDHQ8IZJ6 230 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.57□□□□□ -0.08
GABPB1-206ENST00000543881 GJD2Q9UKL4 321 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
GABPB1-206ENST00000543881 LOC285556D6RIA3 1793 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 UQCRFS1P1P0C7P4 283 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.08
GABPB1-206ENST00000543881 ZNF280CQ8ND82 737 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
GABPB1-206ENST00000543881 SNRKQ9NRH2 765 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 MTMR10Q9NXD2 777 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 RAI14Q9P0K7 980 aa14.57□□□□□ -0.08
GABPB1-206ENST00000543881 HMGCS2P54868 508 aa14.56□□□□□ -0.08
GABPB1-206ENST00000543881 OS9Q13438 667 aaPredicted RBP14.56□□□□□ -0.08
GABPB1-206ENST00000543881 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
GABPB1-206ENST00000543881 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
GABPB1-206ENST00000543881 PLXNB2O15031 1838 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 LDHCP07864 332 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 GSTO1P78417 241 aa14.55□□□□□ -0.08
GABPB1-206ENST00000543881 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms