RNA–Protein interactions for RNA: ENST00000543175.4

PTRH1-208, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTRH1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-208ENST00000543175 GADL1Q6ZQY3 521 aa28.96■■■□□ 2.23
PTRH1-208ENST00000543175 ZNF333Q96JL9 665 aa28.96■■■□□ 2.23
PTRH1-208ENST00000543175 TRIM75PA6NK02 468 aa28.95■■■□□ 2.22
PTRH1-208ENST00000543175 CYP2C8P10632 490 aa28.95■■■□□ 2.22
PTRH1-208ENST00000543175 PRMT2P55345 433 aa28.95■■■□□ 2.22
PTRH1-208ENST00000543175 HSP90AB4PQ58FF6 505 aa28.95■■■□□ 2.22
PTRH1-208ENST00000543175 CCDC84Q86UT8 332 aaPredicted RBP28.95■■■□□ 2.22
PTRH1-208ENST00000543175 DHX36Q9H2U1 1008 aaKnown RBP28.95■■■□□ 2.22
PTRH1-208ENST00000543175 HERC5Q9UII4 1024 aaKnown RBP28.95■■■□□ 2.22
PTRH1-208ENST00000543175 DDX19BQ9UMR2 479 aa28.95■■■□□ 2.22
PTRH1-208ENST00000543175 KIAA0100Q14667 2235 aaKnown RBP28.94■■■□□ 2.22
PTRH1-208ENST00000543175 CTGFP29279 349 aa28.94■■■□□ 2.22
PTRH1-208ENST00000543175 NBPF11Q86T75 865 aa28.94■■■□□ 2.22
PTRH1-208ENST00000543175 AACSQ86V21 672 aa28.94■■■□□ 2.22
PTRH1-208ENST00000543175 SLC45A1Q9Y2W3 748 aa28.94■■■□□ 2.22
PTRH1-208ENST00000543175 ECM2O94769 699 aaPredicted RBP28.93■■■□□ 2.22
PTRH1-208ENST00000543175 BCRP11274 1271 aa28.93■■■□□ 2.22
PTRH1-208ENST00000543175 PSMC4P43686 418 aa28.93■■■□□ 2.22
PTRH1-208ENST00000543175 TGFBRAP1Q8WUH2 860 aa28.93■■■□□ 2.22
PTRH1-208ENST00000543175 PI4KBQ9UBF8 816 aa28.93■■■□□ 2.22
PTRH1-208ENST00000543175 COG6Q9Y2V7 657 aa28.93■■■□□ 2.22
PTRH1-208ENST00000543175 FLT1P17948 1338 aa28.93■■■□□ 2.22
PTRH1-208ENST00000543175 IDH1O75874 414 aaKnown RBP28.92■■■□□ 2.22
PTRH1-208ENST00000543175 CAP2P40123 477 aa28.92■■■□□ 2.22
PTRH1-208ENST00000543175 MAPKAPK5Q8IW41 473 aa28.92■■■□□ 2.22
PTRH1-208ENST00000543175 RPAP2Q8IXW5 612 aaPredicted RBP28.92■■■□□ 2.22
PTRH1-208ENST00000543175 RHPN1Q8TCX5 695 aa28.92■■■□□ 2.22
PTRH1-208ENST00000543175 TRIM47Q96LD4 638 aa28.92■■■□□ 2.22
PTRH1-208ENST00000543175 CYP7A1P22680 504 aa28.91■■■□□ 2.22
PTRH1-208ENST00000543175 TBC1D2Q9BYX2 928 aa28.91■■■□□ 2.22
PTRH1-208ENST00000543175 IL1RAPL2Q9NP60 686 aa28.91■■■□□ 2.22
PTRH1-208ENST00000543175 ZBTB40Q9NUA8 1239 aa28.91■■■□□ 2.22
PTRH1-208ENST00000543175 RCAN3Q9UKA8 241 aa28.91■■■□□ 2.22
PTRH1-208ENST00000543175 RRP1BQ14684 758 aaKnown RBP28.9■■■□□ 2.22
PTRH1-208ENST00000543175 TMEM106CQ9BVX2 250 aa28.9■■■□□ 2.22
PTRH1-208ENST00000543175 SRRDQ9UH36 339 aa28.9■■■□□ 2.22
PTRH1-208ENST00000543175 AGTPBP1Q9UPW5 1226 aa28.9■■■□□ 2.22
PTRH1-208ENST00000543175 NDUFB9Q9Y6M9 179 aa28.9■■■□□ 2.22
PTRH1-208ENST00000543175 HMMRO75330 724 aa28.89■■■□□ 2.22
PTRH1-208ENST00000543175 FMNL1O95466 1100 aaPredicted RBP28.89■■■□□ 2.22
PTRH1-208ENST00000543175 OSBPP22059 807 aa28.89■■■□□ 2.22
PTRH1-208ENST00000543175 HOXD10P28358 340 aa28.89■■■□□ 2.22
PTRH1-208ENST00000543175 DYNLL1P63167 89 aaKnown RBP28.89■■■□□ 2.22
PTRH1-208ENST00000543175 SH3TC2Q8TF17 1288 aa28.89■■■□□ 2.22
PTRH1-208ENST00000543175 SPP2Q13103 211 aa28.88■■■□□ 2.21
PTRH1-208ENST00000543175 PRPF38BQ5VTL8 546 aaKnown RBP28.88■■■□□ 2.21
PTRH1-208ENST00000543175 ZNF280CQ8ND82 737 aa28.88■■■□□ 2.21
PTRH1-208ENST00000543175 ANTXR1Q9H6X2 564 aa28.88■■■□□ 2.21
PTRH1-208ENST00000543175 CERS3Q8IU89 383 aa28.87■■■□□ 2.21
PTRH1-208ENST00000543175 FOXP4Q8IVH2 680 aaPredicted RBP28.87■■■□□ 2.21
PTRH1-208ENST00000543175 SIRT2Q8IXJ6 389 aa28.87■■■□□ 2.21
PTRH1-208ENST00000543175 MAGEB6Q8N7X4 407 aa28.87■■■□□ 2.21
PTRH1-208ENST00000543175 PROCA1Q8NCQ7 364 aaPredicted RBP28.87■■■□□ 2.21
PTRH1-208ENST00000543175 SMCR8Q8TEV9 937 aaPredicted RBP28.87■■■□□ 2.21
PTRH1-208ENST00000543175 KIF1BPQ96EK5 621 aa28.87■■■□□ 2.21
PTRH1-208ENST00000543175 CHMP4BQ9H444 224 aaKnown RBP28.87■■■□□ 2.21
PTRH1-208ENST00000543175 PALD1Q9ULE6 856 aa28.87■■■□□ 2.21
PTRH1-208ENST00000543175 NAV1Q8NEY1 1877 aa28.87■■■□□ 2.21
PTRH1-208ENST00000543175 DDX60LQ5H9U9 1706 aaKnown RBP28.86■■■□□ 2.21
PTRH1-208ENST00000543175 USP17L5A8MUK1 530 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 EN2P19622 333 aaPredicted RBP28.86■■■□□ 2.21
PTRH1-208ENST00000543175 FCGRTP55899 365 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 MAP3K12Q12852 859 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 TMED8Q6PL24 325 aaPredicted RBP28.86■■■□□ 2.21
PTRH1-208ENST00000543175 METTL16Q86W50 562 aaKnown RBP28.86■■■□□ 2.21
PTRH1-208ENST00000543175 CLASRPQ8N2M8 674 aaKnown RBP28.86■■■□□ 2.21
PTRH1-208ENST00000543175 DNAJC18Q9H819 358 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 AS3MTQ9HBK9 375 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 MYPNQ86TC9 1320 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 CENPFP49454 3210 aa28.86■■■□□ 2.21
PTRH1-208ENST00000543175 TREML2Q5T2D2 321 aa28.85■■■□□ 2.21
PTRH1-208ENST00000543175 CRACR2BQ8N4Y2 399 aaPredicted RBP28.85■■■□□ 2.21
PTRH1-208ENST00000543175 MIGA1Q8NAN2 632 aa28.85■■■□□ 2.21
PTRH1-208ENST00000543175 TRIM34Q9BYJ4 488 aa28.85■■■□□ 2.21
PTRH1-208ENST00000543175 PNMA3Q9UL41 463 aa28.85■■■□□ 2.21
PTRH1-208ENST00000543175 APBB1O00213 710 aa28.84■■■□□ 2.21
PTRH1-208ENST00000543175 SLC4A8Q2Y0W8 1093 aa28.84■■■□□ 2.21
PTRH1-208ENST00000543175 SAP30BPQ9UHR5 308 aaKnown RBP28.84■■■□□ 2.21
PTRH1-208ENST00000543175 MYCP01106 439 aaPredicted RBP28.83■■■□□ 2.21
PTRH1-208ENST00000543175 HLA-DOAP06340 250 aa28.83■■■□□ 2.21
PTRH1-208ENST00000543175 ASNSP08243 561 aa28.83■■■□□ 2.21
PTRH1-208ENST00000543175 HMGCS2P54868 508 aa28.83■■■□□ 2.21
PTRH1-208ENST00000543175 RAET1EQ8TD07 263 aa28.83■■■□□ 2.21
PTRH1-208ENST00000543175 TTF1Q15361 905 aaPredicted RBP28.82■■■□□ 2.2
PTRH1-208ENST00000543175 SH3D19Q5HYK7 790 aa28.82■■■□□ 2.2
PTRH1-208ENST00000543175 WDR18Q9BV38 432 aa28.82■■■□□ 2.2
PTRH1-208ENST00000543175 RAB11FIP3O75154 756 aa28.81■■■□□ 2.2
PTRH1-208ENST00000543175 USP5P45974 858 aa28.81■■■□□ 2.2
PTRH1-208ENST00000543175 PRKCZQ05513 592 aa28.81■■■□□ 2.2
PTRH1-208ENST00000543175 GINM1Q9NU53 330 aa28.81■■■□□ 2.2
PTRH1-208ENST00000543175 DOCK3Q8IZD9 2030 aa28.81■■■□□ 2.2
PTRH1-208ENST00000543175 MYH7P12883 1935 aa28.81■■■□□ 2.2
PTRH1-208ENST00000543175 IFIT2P09913 472 aaKnown RBP28.8■■■□□ 2.2
PTRH1-208ENST00000543175 GRK4P32298 578 aa28.8■■■□□ 2.2
PTRH1-208ENST00000543175 JAG1P78504 1218 aa28.8■■■□□ 2.2
PTRH1-208ENST00000543175 PABPC4Q13310 644 aaKnown RBP eCLIP28.8■■■□□ 2.21e-7■■■□□ 16
PTRH1-208ENST00000543175 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.8■■■□□ 2.2
PTRH1-208ENST00000543175 PDE3AQ14432 1141 aa28.79■■■□□ 2.2
PTRH1-208ENST00000543175 ZBTB21Q9ULJ3 1066 aa28.79■■■□□ 2.2
PTRH1-208ENST00000543175 GDF11O95390 407 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms