RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 YY1AP1Q9H869 796 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 ARFGAP3Q9NP61 516 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 JAG2Q9Y219 1238 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 U3KPZ7 1027 aaPredicted RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 AKAP11Q9UKA4 1901 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 SPEF2Q9C093 1822 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 A0A1B0GVL5 298 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 TFRCP02786 760 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 CCDC172P0C7W6 258 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 ATP6V1AP38606 617 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 NLRP12P59046 1061 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 FANCCQ00597 558 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 CAVIN4Q5BKX8 364 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 TRIM65Q6PJ69 517 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 FCHSD1Q86WN1 690 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 KIRREL3Q8IZU9 778 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 GOLGA5Q8TBA6 731 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 LRRC2Q9BYS8 371 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 BRMS1Q9HCU9 246 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 BCCIPQ9P287 314 aaKnown RBP eCLIP5.97□□□□□ -1.45
PROM1-220ENST00000540805 PCDHA7Q9UN72 937 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 PARP3Q9Y6F1 533 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 A0A1W2PQ27 194 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 A0A1W2PQ64 194 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 A0A1W2PQD8 194 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 ATRNO75882 1429 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 PTPN12Q05209 780 aaKnown RBP5.96□□□□□ -1.45
PROM1-220ENST00000540805 STK38Q15208 465 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 ADALQ6DHV7 355 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 SBF2Q86WG5 1849 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 SGSM3Q96HU1 749 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 MKNK2Q9HBH9 465 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 BTG4Q9NY30 223 aa5.96□□□□□ -1.45
PROM1-220ENST00000540805 MYO5AQ9Y4I1 1855 aaKnown RBP5.96□□□□□ -1.45
PROM1-220ENST00000540805 H7C1W4 665 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 BIN1O00499 593 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 GUCY1B3Q02153 619 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 PPP2R3AQ06190 1150 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 GOLGA6L1Q8N7Z2 621 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 ANKRD20A12PQ8NF67 263 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 FBXO18Q8NFZ0 1043 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 EXOC4Q96A65 974 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 CDK5RAP3Q96JB5 506 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 UTP14AQ9BVJ6 771 aaKnown RBP5.96□□□□□ -1.46
PROM1-220ENST00000540805 PSD3Q9NYI0 1048 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 GOLGA6L9A6NEM1 432 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 RANBP6O60518 1105 aaKnown RBP5.96□□□□□ -1.46
PROM1-220ENST00000540805 A1BGP04217 495 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 LMOD1P29536 600 aaPredicted RBP5.96□□□□□ -1.46
PROM1-220ENST00000540805 NDUFA8P51970 172 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 PPP2R5AQ15172 486 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 JAKMIP3Q5VZ66 844 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 LEKR1Q6ZMV7 388 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 ANKRD13DQ6ZTN6 518 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 EGFL6Q8IUX8 553 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 HELBQ8NG08 1087 aaPredicted RBP5.96□□□□□ -1.46
PROM1-220ENST00000540805 SLC24A3Q9HC58 644 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 ADAM21Q9UKJ8 722 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 ASAP1Q9ULH1 1129 aa5.96□□□□□ -1.46
PROM1-220ENST00000540805 TNS1Q9HBL0 1735 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 IKBKBO14920 756 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 SERPINC1P01008 464 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 HMGB1P09429 215 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 UBASH3AP57075 661 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 PPARDQ03181 441 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 TTC31Q49AM3 519 aaPredicted RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 SOGA3Q5TF21 947 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 TTC19Q6DKK2 380 aaPredicted RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 CTR9Q6PD62 1173 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 DDX46Q7L014 1031 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 RAB11FIP4Q86YS3 637 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 PLBD2Q8NHP8 589 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 RTEL1Q9NZ71 1219 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 TAF1LQ8IZX4 1826 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 LY75O60449 1722 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 EIF3CLB5ME19 914 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 CTDNEP1O95476 244 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 CYP21A2P08686 494 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 CCT2P78371 535 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 APOBRQ0VD83 1088 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 NCAPHQ15003 741 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 CFAP100Q494V2 611 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 NOM1Q5C9Z4 860 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 CCDC125Q86Z20 511 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 KCNG4Q8TDN1 519 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 GOLGA1Q92805 767 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 EIF3CQ99613 913 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 VAT1LQ9HCJ6 419 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 RFX7Q2KHR2 1363 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 VWA3AA6NCI4 1184 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 ARHGAP6O43182 974 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 IVLP07476 585 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 TOP1P11387 765 aaKnown RBP5.95□□□□□ -1.46
PROM1-220ENST00000540805 ACTN2P35609 894 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 ZNF76P36508 570 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 GNG11P61952 73 aa5.95□□□□□ -1.46
PROM1-220ENST00000540805 FAM182BQ5T319 152 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms