RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 VPS18Q9P253 973 aa15.92■□□□□ 0.14
SCNN1A-215ENST00000540037 TACC3Q9Y6A5 838 aa15.92■□□□□ 0.14
SCNN1A-215ENST00000540037 CAMTA1Q9Y6Y1 1673 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 CIAO1O76071 339 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 ZFYP08048 801 aaPredicted RBP15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 RHOXF2BP0C7M4 288 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 NR1I3Q14994 352 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 RHOXF2Q9BQY4 288 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 ZKSCAN3Q9BRR0 538 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 CTDSPL2Q05D32 466 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 FOXR1Q6PIV2 292 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 NOSTRINQ8IVI9 506 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 LY9Q9HBG7 655 aa15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 FBXO2Q9UK22 296 aaPredicted RBP15.91■□□□□ 0.14
SCNN1A-215ENST00000540037 MORC3Q14149 939 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 ZNF569Q5MCW4 686 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 PIH1D3Q9NQM4 214 aaKnown RBP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 ADGRG1Q9Y653 693 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 DDX60Q8IY21 1712 aaKnown RBP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 GOLGA6L9A6NEM1 432 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 MAP2K7O14733 419 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 CCDC175P0C221 793 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 GPS2Q13227 327 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 TMEM67Q5HYA8 995 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 BEND6Q5SZJ8 279 aaPredicted RBP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 DIS3L2Q8IYB7 885 aaKnown RBP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 ENOX1Q8TC92 643 aaKnown RBP15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 OXER1Q8TDS5 423 aa15.9■□□□□ 0.14
SCNN1A-215ENST00000540037 TJP1Q07157 1748 aa15.89■□□□□ 0.14
SCNN1A-215ENST00000540037 AKR1B15C9JRZ8 316 aaPredicted RBP15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 PHACTR2O75167 634 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 CDKL5O76039 1030 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 AFMP43652 599 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 SARSP49591 514 aaKnown RBP15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 APTXQ7Z2E3 356 aaKnown RBP15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 SRGAP1Q7Z6B7 1085 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 ABCB6Q9NP58 842 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 ECM29Q5VYK3 1845 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 A0A087X0B3 334 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 CCDC151A5D8V7 595 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 TAF7LQ5H9L4 462 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 FAM205CA6NFA0 338 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 MYO1CO00159 1063 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 ADD2P35612 726 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 NUTM2AQ8IVF1 878 aaPredicted RBP15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 IGSF22Q8N9C0 903 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 ZSWIM5Q9P217 1185 aa15.89■□□□□ 0.13
SCNN1A-215ENST00000540037 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 CPLX2Q6PUV4 134 aaKnown RBP15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 WWC3Q9ULE0 1092 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 MYO5AQ9Y4I1 1855 aaKnown RBP15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 A0A1B0GTH6 734 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 ACTN4O43707 911 aaKnown RBP15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 CDC25AP30304 524 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 CASP14P31944 242 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 MLKLQ8NB16 471 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 STAMQ92783 540 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 CSRNP2Q9H175 543 aa15.88■□□□□ 0.13
SCNN1A-215ENST00000540037 PTPREP23469 700 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 SLC20A2Q08357 652 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 SSRP1Q08945 709 aaKnown RBP15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 RRP12Q5JTH9 1297 aaKnown RBP15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 SLC35F6Q8N357 371 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 EPSTI1Q96J88 318 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 AKAP2Q9Y2D5 859 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 FAN1Q9Y2M0 1017 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 GLI3P10071 1580 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 RNF225M0QZC1 329 aaPredicted RBP15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 IFIT3O14879 490 aaKnown RBP15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 MMP1P03956 469 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 FXR1P51114 621 aaKnown RBP eCLIP15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 VSNL1P62760 191 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 NT5DC1Q5TFE4 455 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 WDR19Q8NEZ3 1342 aa15.87■□□□□ 0.13
SCNN1A-215ENST00000540037 ANKRD65E5RJM6 399 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 MYO1BO43795 1136 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 METTL24Q5JXM2 366 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 AK7Q96M32 723 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 CDC23Q9UJX2 597 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 TMEM94Q12767 1356 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 JAKMIP3Q5VZ66 844 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 TICAM2Q86XR7 235 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 PLEKHA4Q9H4M7 779 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 RSPH14Q9UHP6 348 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 SPEF2Q9C093 1822 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 hCG_1642624A0A1W2PR95 340 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 KIF5CO60282 957 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 CCT6AP40227 531 aaKnown RBP15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 PLCD1P51178 756 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 BRD3Q15059 726 aa15.86■□□□□ 0.13
SCNN1A-215ENST00000540037 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 366.7 ms