RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TLR3O15455 904 aaKnown RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 IGKV5-2P06315 115 aa9.19□□□□□ -0.94
GNE-205ENST00000539815 BRDTQ58F21 947 aaPredicted RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 EDC3Q96F86 508 aaKnown RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 GPHNQ9NQX3 736 aaPredicted RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 MSRAQ9UJ68 235 aa9.19□□□□□ -0.94
GNE-205ENST00000539815 ZHX1Q9UKY1 873 aaPredicted RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
GNE-205ENST00000539815 IL1R1P14778 569 aa9.19□□□□□ -0.94
GNE-205ENST00000539815 MAPK8IP2Q13387 824 aaPredicted RBP9.19□□□□□ -0.94
GNE-205ENST00000539815 TTC28Q96AY4 2481 aa9.19□□□□□ -0.94
GNE-205ENST00000539815 FAM205AQ6ZU69 1335 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 ENTPD3O75355 529 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 KCTD2Q14681 263 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 PLEKHH3Q7Z736 793 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
GNE-205ENST00000539815 RNPC3Q96LT9 517 aaKnown RBP9.18□□□□□ -0.94
GNE-205ENST00000539815 ZDHHC15Q96MV8 337 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 TRIM35Q9UPQ4 493 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 AFDNP55196 1824 aaKnown RBP9.18□□□□□ -0.94
GNE-205ENST00000539815 AKAP11Q9UKA4 1901 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 SRGAP3O43295 1099 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 ANKLE1Q8NAG6 615 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 SEMA3EO15041 775 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 NCLP19338 710 aaKnown RBP9.18□□□□□ -0.94
GNE-205ENST00000539815 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
GNE-205ENST00000539815 FAM110CQ1W6H9 321 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 CERS5Q8N5B7 392 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 PXYLP1Q8TE99 480 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 PLA2G12BQ9BX93 195 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 TBC1D2Q9BYX2 928 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 TOMM22Q9NS69 142 aa9.18□□□□□ -0.94
GNE-205ENST00000539815 KIF28PB7ZC32 967 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 MAP3K12Q12852 859 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 AAK1Q2M2I8 961 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 RNF180Q86T96 592 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 PUS3Q9BZE2 481 aaKnown RBP9.17□□□□□ -0.94
GNE-205ENST00000539815 DHX36Q9H2U1 1008 aaKnown RBP9.17□□□□□ -0.94
GNE-205ENST00000539815 BICC1Q9H694 974 aaKnown RBP9.17□□□□□ -0.94
GNE-205ENST00000539815 PRKRIP1Q9H875 184 aaPredicted RBP9.17□□□□□ -0.94
GNE-205ENST00000539815 PI4KBQ9UBF8 816 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 WDR63Q8IWG1 891 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 C19orf81C9J6K1 198 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 RRAGDQ9NQL2 400 aaPredicted RBP9.17□□□□□ -0.94
GNE-205ENST00000539815 TMEM51Q9NW97 253 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 PCDHAC2Q9Y5I4 1007 aa9.17□□□□□ -0.94
GNE-205ENST00000539815 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 PTPN18Q99952 460 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 ARHGEF10LQ9HCE6 1279 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 TMEM39AQ9NV64 488 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 HCN4Q9Y3Q4 1203 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 SCN11AQ9UI33 1791 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 APPP05067 770 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 RARBP10826 455 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 FERMT2Q96AC1 680 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 DAGLAQ9Y4D2 1042 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 CYP7A1P22680 504 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 MAGEA10P43363 369 aaPredicted RBP9.16□□□□□ -0.94
GNE-205ENST00000539815 CDC42EP5Q6NZY7 148 aa9.16□□□□□ -0.94
GNE-205ENST00000539815 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
GNE-205ENST00000539815 COL1A1P02452 1464 aaPredicted RBP9.15□□□□□ -0.94
GNE-205ENST00000539815 C17orf99Q6UX52 265 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 FOXP4Q8IVH2 680 aaPredicted RBP9.15□□□□□ -0.94
GNE-205ENST00000539815 MAPKAPK5Q8IW41 473 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 SUCLG2Q96I99 432 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 ZBED2Q9BTP6 218 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 SLC28A3Q9HAS3 691 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 FER1L6Q2WGJ9 1857 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 CSF1RP07333 972 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 Q7L0L9 218 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 CERS3Q8IU89 383 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 MAFAQ8NHW3 353 aaPredicted RBP9.15□□□□□ -0.94
GNE-205ENST00000539815 GLT1D1Q96MS3 346 aa9.15□□□□□ -0.94
GNE-205ENST00000539815 SAP30BPQ9UHR5 308 aaKnown RBP9.15□□□□□ -0.94
GNE-205ENST00000539815 KIF13BQ9NQT8 1826 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 CACNA1SQ13698 1873 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L15C9J2P7 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L11C9JVI0 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L18D6R9N7 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L22D6RA61 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L19D6RCP7 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L20D6RJB6 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 SURF6O75683 361 aaKnown RBP9.15□□□□□ -0.95
GNE-205ENST00000539815 PRDX5P30044 214 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L24Q0WX57 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 LRRC24Q50LG9 513 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 USP17L2Q6R6M4 530 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 FAM122AQ96E09 287 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 HERC5Q9UII4 1024 aaKnown RBP9.15□□□□□ -0.95
GNE-205ENST00000539815 GABRQQ9UN88 632 aa9.15□□□□□ -0.95
GNE-205ENST00000539815 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
GNE-205ENST00000539815 FAM47CQ5HY64 1035 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms