RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 ZBTB48P10074 688 aaPredicted RBP12.97□□□□□ -0.33
HMGA2-209ENST00000539662 USP5P45974 858 aa12.97□□□□□ -0.33
HMGA2-209ENST00000539662 NUCB1Q02818 461 aa12.97□□□□□ -0.33
HMGA2-209ENST00000539662 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
HMGA2-209ENST00000539662 HOOK2Q96ED9 719 aa12.97□□□□□ -0.33
HMGA2-209ENST00000539662 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
HMGA2-209ENST00000539662 BAZ2AQ9UIF9 1905 aaKnown RBP12.97□□□□□ -0.33
HMGA2-209ENST00000539662 CYP2D6P10635 497 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 PLCG2P16885 1265 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 PLCD1P51178 756 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 PDE1AP54750 535 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 NOL9Q5SY16 702 aaKnown RBP12.96□□□□□ -0.33
HMGA2-209ENST00000539662 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 ERO1BQ86YB8 467 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 IFNL1Q8IU54 200 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 KBTBD3Q8NAB2 608 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 OSBP2Q969R2 916 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.33
HMGA2-209ENST00000539662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.333e-6■■□□□ 12.2
HMGA2-209ENST00000539662 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
HMGA2-209ENST00000539662 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
HMGA2-209ENST00000539662 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
HMGA2-209ENST00000539662 M0R2C6 588 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 TBC1D12O60347 775 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 PDE4AP27815 886 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 MOGSQ13724 837 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 CCL15Q16663 113 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 PI4KBQ9UBF8 816 aa12.95□□□□□ -0.34
HMGA2-209ENST00000539662 PTPRFP10586 1907 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 GLRX3O76003 335 aaKnown RBP12.94□□□□□ -0.34
HMGA2-209ENST00000539662 PTPRAP18433 802 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 PPATQ06203 517 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 SREBF2Q12772 1141 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 PPIL2Q13356 520 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 DGKZQ13574 1117 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
HMGA2-209ENST00000539662 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMGA2-209ENST00000539662 DHX36Q9H2U1 1008 aaKnown RBP12.94□□□□□ -0.34
HMGA2-209ENST00000539662 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
HMGA2-209ENST00000539662 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 SAGE1Q9NXZ1 904 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 ZHX2Q9Y6X8 837 aa12.94□□□□□ -0.34
HMGA2-209ENST00000539662 ERC2O15083 957 aa12.93□□□□□ -0.34
HMGA2-209ENST00000539662 RNF113AO15541 343 aaKnown RBP12.93□□□□□ -0.34
HMGA2-209ENST00000539662 GDF11O95390 407 aa12.93□□□□□ -0.34
HMGA2-209ENST00000539662 CAP1Q01518 475 aa12.93□□□□□ -0.34
HMGA2-209ENST00000539662 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
HMGA2-209ENST00000539662 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
HMGA2-209ENST00000539662 CRNKL1Q9BZJ0 848 aaKnown RBP12.93□□□□□ -0.34
HMGA2-209ENST00000539662 BTBD19C9JJ37 291 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 CA12O43570 354 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 CTNND1O60716 968 aaKnown RBP12.92□□□□□ -0.34
HMGA2-209ENST00000539662 CAP2P40123 477 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 GTF2A2P52657 109 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 CRHR2Q13324 411 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 TMED8Q6PL24 325 aaPredicted RBP12.92□□□□□ -0.34
HMGA2-209ENST00000539662 SKAP1Q86WV1 359 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
HMGA2-209ENST00000539662 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 FSD1Q9BTV5 496 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
HMGA2-209ENST00000539662 HERC5Q9UII4 1024 aaKnown RBP12.92□□□□□ -0.34
HMGA2-209ENST00000539662 KCNH4Q9UQ05 1017 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 SLC4A4Q9Y6R1 1079 aa12.92□□□□□ -0.34
HMGA2-209ENST00000539662 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 SHMT1P34896 483 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 INHBEP58166 350 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 GPAT2Q6NUI2 795 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 CRACR2BQ8N4Y2 399 aaPredicted RBP12.91□□□□□ -0.34
HMGA2-209ENST00000539662 APPBP2Q92624 585 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
HMGA2-209ENST00000539662 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 USP17L21D6R901 530 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 GPR25O00155 361 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 FOXP2O15409 715 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 GPAA1O43292 621 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 POLR3DP05423 398 aaPredicted RBP12.9□□□□□ -0.34
HMGA2-209ENST00000539662 HLA-DOAP06340 250 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 CETPP11597 493 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 GABPAQ06546 454 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 ZMYM1Q5SVZ6 1142 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 CERS3Q8IU89 383 aa12.9□□□□□ -0.34
HMGA2-209ENST00000539662 ZNF296Q8WUU4 475 aaPredicted RBP12.9□□□□□ -0.34
HMGA2-209ENST00000539662 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
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