RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CMTR1Q8N1G2 835 aaKnown RBP14.46□□□□□ -0.1
SFSWAP-208ENST00000539506 TMEM87BQ96K49 555 aa14.46□□□□□ -0.1
SFSWAP-208ENST00000539506 HPSEQ9Y251 543 aa14.46□□□□□ -0.1
SFSWAP-208ENST00000539506 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.46□□□□□ -0.15e-7■■■■□ 25.2
SFSWAP-208ENST00000539506 ARAP2Q8WZ64 1704 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 NFXL1Q6ZNB6 911 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 MIGA1Q8NAN2 632 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 NAPBQ9H115 298 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 IQSEC3Q9UPP2 1182 aaPredicted RBP14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 COL16A1Q07092 1604 aaPredicted RBP14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 SLC5A1P13866 664 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 FANCCQ00597 558 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 PNOCQ13519 176 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 SKIDA1Q1XH10 827 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 TEX35Q5T0J7 233 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 MPHOSPH8Q99549 860 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 NAT10Q9H0A0 1025 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 DOT1LQ8TEK3 1739 aa14.45□□□□□ -0.1
SFSWAP-208ENST00000539506 A0A0G2JS52 829 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 IFIT3O14879 490 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 ATP2B1P20020 1258 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 IARSP41252 1262 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 DOCK2Q92608 1830 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 ATP6V1AP38606 617 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 LIFRP42702 1097 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 AKNAD1Q5T1N1 836 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 FOXP4Q8IVH2 680 aaPredicted RBP14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 DESI2Q9BSY9 194 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 SLC26A6Q9BXS9 759 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 CCDC87Q9NVE4 849 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 FOXN1O15353 648 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 NEMFO60524 1076 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 NTSR2O95665 410 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 NLRP12P59046 1061 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 BMS1Q14692 1282 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 C3orf67Q6ZVT6 689 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 TIGD1Q96MW7 591 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
SFSWAP-208ENST00000539506 COL14A1Q05707 1796 aaKnown RBP14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 TFRCP02786 760 aaKnown RBP14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 ADKP55263 362 aaKnown RBP14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 UBASH3AP57075 661 aa14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 GRIN1Q05586 938 aa14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 RRP12Q5JTH9 1297 aaKnown RBP14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 KCNJ14Q9UNX9 436 aa14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 SLC12A7Q9Y666 1083 aa14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 MYH14Q7Z406 1995 aaKnown RBP14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 ZNF827Q17R98 1081 aa14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 SLC4A4Q9Y6R1 1079 aa14.43□□□□□ -0.1
SFSWAP-208ENST00000539506 BTBD18B2RXH4 712 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 CDKL5O76039 1030 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 CAPN2P17655 700 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 SYKP43405 635 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 CHRNDQ07001 517 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 LONRF3Q496Y0 759 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 TMCO3Q6UWJ1 677 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 MARCH10Q8NA82 808 aaPredicted RBP14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 SHISA4Q96DD7 197 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 AK7Q96M32 723 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 BCL9LQ86UU0 1499 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 A0A0U1RQJ8 604 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 COBLO75128 1261 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 PPP6R2O75170 966 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 FMNL1O95466 1100 aaPredicted RBP14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 RESP18Q5W5W9 173 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 ATRIPQ8WXE1 791 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 TUBE1Q9UJT0 475 aa14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 NIP7Q9Y221 180 aaKnown RBP eCLIP14.42□□□□□ -0.1
SFSWAP-208ENST00000539506 LOC102724428A0A0B4J2F2 783 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 SASH3O75995 380 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 SIK1P57059 783 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 GSDMDP57764 484 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 METTL16Q86W50 562 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 CERS3Q8IU89 383 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 TRMT44Q8IYL2 757 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 SDR42E1Q8WUS8 393 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 CPLX3Q8WVH0 158 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 WDR24Q96S15 920 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 FANCLQ9NW38 375 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 PLCH1Q4KWH8 1693 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 CCDC66A2RUB6 948 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 STAG1Q8WVM7 1258 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 FAM237AA0A1B0GTK4 181 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 H2AFXP16104 143 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 BMP6P22004 513 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 GNG11P61952 73 aa14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 OSBPL5Q9H0X9 879 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-208ENST00000539506 TIAM2Q8IVF5 1701 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms