RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 POLR3DP05423 398 aaPredicted RBP23.97■■□□□ 1.43
SMPDL3A-203ENST00000539041 CCDC192P0DO97 292 aa23.97■■□□□ 1.43
SMPDL3A-203ENST00000539041 PODXL2Q9NZ53 605 aa23.97■■□□□ 1.43
SMPDL3A-203ENST00000539041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.97■■□□□ 1.43
SMPDL3A-203ENST00000539041 MYH1P12882 1939 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 ORC4O43929 436 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 YEATS4O95619 227 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 TRIM29Q14134 588 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 ZNF827Q17R98 1081 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 RBM43Q6ZSC3 357 aaKnown RBP23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 TMC4Q7Z404 712 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 CCAR1Q8IX12 1150 aaKnown RBP23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 ZSCAN10Q96SZ4 725 aaPredicted RBP23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 POLR3EQ9NVU0 708 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 SLC3A2P08195 630 aaKnown RBP23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 CAMK4Q16566 473 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 CD209Q9NNX6 404 aa23.96■■□□□ 1.43
SMPDL3A-203ENST00000539041 PPP2R5BQ15173 497 aa23.95■■□□□ 1.42
SMPDL3A-203ENST00000539041 STK38Q15208 465 aa23.95■■□□□ 1.42
SMPDL3A-203ENST00000539041 IQCA1Q86XH1 822 aa23.95■■□□□ 1.42
SMPDL3A-203ENST00000539041 TRIM22Q8IYM9 498 aa23.95■■□□□ 1.42
SMPDL3A-203ENST00000539041 AKT1S1Q96B36 256 aa23.95■■□□□ 1.42
SMPDL3A-203ENST00000539041 DDX60LQ5H9U9 1706 aaKnown RBP23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 LDHCP07864 332 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 IL1R1P14778 569 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 ME1P48163 572 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 CCDC73Q6ZRK6 1079 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 ENAHQ8N8S7 591 aaPredicted RBP23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 FANCBQ8NB91 859 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 LINC00301Q8NCQ3 95 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 NUP133Q8WUM0 1156 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 CLIC4Q9Y696 253 aa23.94■■□□□ 1.42
SMPDL3A-203ENST00000539041 APBA3O96018 575 aa23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 NLGN1Q8N2Q7 840 aa23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 KCNG4Q8TDN1 519 aa23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 RRAGDQ9NQL2 400 aaPredicted RBP23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 PRDM1O75626 825 aa23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 IFIT1BQ5T764 474 aaKnown RBP23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 NBPF11Q86T75 865 aa23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 COL23A1Q86Y22 540 aaPredicted RBP23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 NOL10Q9BSC4 688 aaKnown RBP23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 PCDHA7Q9UN72 937 aa23.93■■□□□ 1.42
SMPDL3A-203ENST00000539041 DEXIO95424 95 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 BAG3O95817 575 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 PPP4CP60510 307 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 GNL2Q13823 731 aaKnown RBP23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 ADALQ6DHV7 355 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 CRACR2BQ8N4Y2 399 aaPredicted RBP23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 TBC1D16Q8TBP0 767 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 GOLPH3LQ9H4A5 285 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 MROH7-TTC4A0A0A0MT08 1334 aa23.92■■□□□ 1.42
SMPDL3A-203ENST00000539041 PPEF1O14829 653 aaPredicted RBP23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 CYP2D6P10635 497 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 USP5P45974 858 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 TYRO3Q06418 890 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 PDE4BQ07343 736 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 SF3A1Q15459 793 aaKnown RBP23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 GRIK5Q16478 980 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 ANO1Q5XXA6 986 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 SP8Q8IXZ3 490 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 CKAP2LQ8IYA6 745 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 FSIP1Q8NA03 581 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 A0A1W2PQ27 194 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 A0A1W2PQ64 194 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 A0A1W2PQD8 194 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 SPTLC2O15270 562 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 CATIPQ7Z7H3 387 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 FLAD1Q8NFF5 587 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 MCM9Q9NXL9 1143 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 POLLQ9UGP5 575 aa23.91■■□□□ 1.42
SMPDL3A-203ENST00000539041 QSER1Q2KHR3 1735 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 ESPNB1AK53 854 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 CTAGE5O15320 804 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 CALM1P0DP23 149 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 CALM2P0DP24 149 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 CALM3P0DP25 149 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 U2AF2P26368 475 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 EVX2Q03828 476 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 FAM160A1Q05DH4 1040 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 DIXDC1Q155Q3 683 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 HS1BP3Q53T59 392 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 SH3RF3Q8TEJ3 882 aaPredicted RBP23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 MRPS27Q92552 414 aaKnown RBP23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 MKRN1Q9UHC7 482 aaKnown RBP23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 MRVI1Q9Y6F6 885 aa23.9■■□□□ 1.42
SMPDL3A-203ENST00000539041 UBE2Q2LH0YL09 131 aa23.89■■□□□ 1.42
SMPDL3A-203ENST00000539041 NT5C2P49902 561 aa23.89■■□□□ 1.42
SMPDL3A-203ENST00000539041 CERS3Q8IU89 383 aa23.89■■□□□ 1.42
SMPDL3A-203ENST00000539041 ENGASEQ8NFI3 743 aa23.89■■□□□ 1.42
SMPDL3A-203ENST00000539041 RBM28Q9NW13 759 aaKnown RBP23.89■■□□□ 1.42
SMPDL3A-203ENST00000539041 ROBO3Q96MS0 1386 aa23.89■■□□□ 1.41
SMPDL3A-203ENST00000539041 DDAH1O94760 285 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 USP17L8P0C7I0 530 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 GUCY1A2P33402 732 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 SNW1Q13573 536 aaKnown RBP23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 RNF26Q9BY78 433 aaPredicted RBP23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 TAOK2Q9UL54 1235 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 MYH8P13535 1937 aa23.88■■□□□ 1.41
SMPDL3A-203ENST00000539041 EP400Q96L91 3159 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms