RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
LDHA-216ENST00000538451 MCM5P33992 734 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 PPARAQ07869 468 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 ESR2Q92731 530 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 IPO9Q96P70 1041 aaKnown RBP11.93□□□□□ -0.5
LDHA-216ENST00000538451 GMLQ99445 158 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 TRIM34Q9BYJ4 488 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 TOMM22Q9NS69 142 aa11.93□□□□□ -0.5
LDHA-216ENST00000538451 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 USP17L21D6R901 530 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 RHBDL3P58872 404 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 HAND2P61296 217 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 APOBEC3HQ6NTF7 200 aaKnown RBP11.92□□□□□ -0.5
LDHA-216ENST00000538451 CDC42EP5Q6NZY7 148 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 CTR9Q6PD62 1173 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 DHX32Q7L7V1 743 aaKnown RBP11.92□□□□□ -0.5
LDHA-216ENST00000538451 STAG1Q8WVM7 1258 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
LDHA-216ENST00000538451 MTA3Q9BTC8 594 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 EPB41L4AQ9HCS5 686 aaPredicted RBP11.92□□□□□ -0.5
LDHA-216ENST00000538451 MYOZ2Q9NPC6 264 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 PDRG1Q9NUG6 133 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
LDHA-216ENST00000538451 PALD1Q9ULE6 856 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 FLT1P17948 1338 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
LDHA-216ENST00000538451 POTECB2RU33 542 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 ENTPD3O75355 529 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 RPS6KB1P23443 525 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 ZNF280AP59817 542 aaPredicted RBP11.91□□□□□ -0.5
LDHA-216ENST00000538451 PICALMQ13492 652 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 CCDC178Q5BJE1 867 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 ZSCAN29Q8IWY8 852 aaPredicted RBP11.91□□□□□ -0.5
LDHA-216ENST00000538451 TMTC2Q8N394 836 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
LDHA-216ENST00000538451 KIF2CQ99661 725 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 MKNK2Q9HBH9 465 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 CNOT7Q9UIV1 285 aaKnown RBP11.91□□□□□ -0.5
LDHA-216ENST00000538451 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
LDHA-216ENST00000538451 K7ELQ4 463 aaPredicted RBP11.9□□□□□ -0.5
LDHA-216ENST00000538451 FOXP2O15409 715 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
LDHA-216ENST00000538451 APLP1P51693 650 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 C12orf60Q5U649 245 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 ZNF444Q8N0Y2 327 aaPredicted RBP11.9□□□□□ -0.5
LDHA-216ENST00000538451 KCNV2Q8TDN2 545 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 HOOK2Q96ED9 719 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
LDHA-216ENST00000538451 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
LDHA-216ENST00000538451 ALDH8A1Q9H2A2 487 aaPredicted RBP11.9□□□□□ -0.5
LDHA-216ENST00000538451 SWAP70Q9UH65 585 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 HACL1Q9UJ83 578 aa11.9□□□□□ -0.5
LDHA-216ENST00000538451 ADCK5Q3MIX3 580 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
LDHA-216ENST00000538451 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 FAM83AQ86UY5 434 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
LDHA-216ENST00000538451 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
LDHA-216ENST00000538451 UBAC1Q9BSL1 405 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 TDRD3Q9H7E2 651 aaKnown RBP11.89□□□□□ -0.51
LDHA-216ENST00000538451 SH2B1Q9NRF2 756 aaPredicted RBP11.89□□□□□ -0.51
LDHA-216ENST00000538451 PI4KBQ9UBF8 816 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
LDHA-216ENST00000538451 LIMCH1Q9UPQ0 1083 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 COL4A5P29400 1685 aa11.89□□□□□ -0.51
LDHA-216ENST00000538451 ORC4O43929 436 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
LDHA-216ENST00000538451 CTDSPL2Q05D32 466 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 PNMA8AQ86V59 439 aaPredicted RBP11.88□□□□□ -0.51
LDHA-216ENST00000538451 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
LDHA-216ENST00000538451 FBXL16Q8N461 479 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
LDHA-216ENST00000538451 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 GPRC5DQ9NZD1 345 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 ZNF70Q9UC06 446 aaPredicted RBP11.88□□□□□ -0.51
LDHA-216ENST00000538451 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 SCN4AP35499 1836 aa11.88□□□□□ -0.51
LDHA-216ENST00000538451 TSPY2A6NKD2 308 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 WNT10BO00744 389 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 PRC1O43663 620 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 RANBP6O60518 1105 aaKnown RBP11.87□□□□□ -0.51
LDHA-216ENST00000538451 EPHX2P34913 555 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 RBM26Q5T8P6 1007 aaKnown RBP11.87□□□□□ -0.51
LDHA-216ENST00000538451 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 APOBEC3FQ8IUX4 373 aaKnown RBP11.87□□□□□ -0.51
LDHA-216ENST00000538451 FAM151AQ8WW52 585 aa11.87□□□□□ -0.51
LDHA-216ENST00000538451 EHD4Q9H223 541 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms