RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 PTK7Q13308 1070 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 CRTC2Q53ET0 693 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-207ENST00000537965 GPC2Q8N158 579 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 SVOPQ8N4V2 548 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-207ENST00000537965 TMX4Q9H1E5 349 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-207ENST00000537965 VRTNQ9H8Y1 702 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 ATXN7L1Q9ULK2 861 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-207ENST00000537965 NIP7Q9Y221 180 aaKnown RBP eCLIP7.06□□□□□ -1.286e-44■■■■□ 24.8
SNHG1-207ENST00000537965 A0A1W2PNR3 127 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 RASSF10A6NK89 507 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 FAM196BA6NMK8 535 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 FZD9O00144 591 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 TXLNAP40222 546 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 IARSP41252 1262 aaKnown RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 ECE1P42892 770 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 ARSJQ5FYB0 599 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 TBCELQ5QJ74 424 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 FIGNL1Q6PIW4 674 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 LYPD4Q6UWN0 246 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 CNTROBQ8N137 903 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 SYNE4Q8N205 404 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 TSEN2Q8NCE0 465 aaKnown RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 ZIC5Q96T25 663 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 PSMD1Q99460 953 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 TSPAN10Q9H1Z9 355 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 ZNF277Q9NRM2 450 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
SNHG1-207ENST00000537965 USP16Q9Y5T5 823 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 AKAP11Q9UKA4 1901 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 PDE4DIPQ5VU43 2346 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
SNHG1-207ENST00000537965 SERTM1A2A2V5 107 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 ERVV-1B6SEH8 477 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 BNIP3LO60238 219 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 ARHGEF15O94989 841 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 CELA2BP08218 269 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-207ENST00000537965 PRKAR2BP31323 418 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 PSMA6P60900 246 aaKnown RBP7.04□□□□□ -1.28
SNHG1-207ENST00000537965 TAF7Q15545 349 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-207ENST00000537965 ERICH6Q7L0X2 663 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 PNISRQ8TF01 805 aaKnown RBP7.04□□□□□ -1.28
SNHG1-207ENST00000537965 RPGRQ92834 1020 aaKnown RBP7.04□□□□□ -1.28
SNHG1-207ENST00000537965 VPS33BQ9H267 617 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 PCDHGC4Q9Y5F7 938 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 ADAMTSL1Q8N6G6 1762 aa7.04□□□□□ -1.28
SNHG1-207ENST00000537965 WDR33Q9C0J8 1336 aaKnown RBP7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L15C9J2P7 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L10C9JJH3 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L13C9JLJ4 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L12C9JPN9 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L11C9JVI0 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L21D6R901 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L18D6R9N7 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L22D6RA61 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L17D6RBQ6 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L19D6RCP7 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP17L20D6RJB6 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 EML1O00423 815 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 KCNQ3O43525 872 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 U2AF1L5P0DN76 240 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-207ENST00000537965 MAP2K3P46734 347 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 LBX1P52954 281 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-207ENST00000537965 U2AF1Q01081 240 aaKnown RBP eCLIP7.03□□□□□ -1.287e-8■■□□□ 12.7
SNHG1-207ENST00000537965 USP17L24Q0WX57 530 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 DPYDQ12882 1025 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 USP50Q70EL3 339 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-207ENST00000537965 ABHD17AQ96GS6 310 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 PHACTR3Q96KR7 559 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 ABT1Q9ULW3 272 aaKnown RBP7.03□□□□□ -1.28
SNHG1-207ENST00000537965 ZNF232Q9UNY5 417 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 ADAMTS8Q9UP79 889 aa7.03□□□□□ -1.28
SNHG1-207ENST00000537965 COL3A1P02461 1466 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-207ENST00000537965 RNF123Q5XPI4 1314 aa7.02□□□□□ -1.28
SNHG1-207ENST00000537965 ZNF541Q9H0D2 1346 aa7.02□□□□□ -1.28
SNHG1-207ENST00000537965 FAM177BA6PVY3 158 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-207ENST00000537965 FGFR3P22607 806 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 CRY2Q49AN0 593 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 KIF6Q6ZMV9 814 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 PPP1R42Q7Z4L9 355 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 SUPT20HQ8NEM7 779 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 ACDQ96AP0 544 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 RBM17Q96I25 401 aaKnown RBP7.02□□□□□ -1.29
SNHG1-207ENST00000537965 CRAMP1Q96RY5 1269 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 PNNQ9H307 717 aaKnown RBP7.02□□□□□ -1.29
SNHG1-207ENST00000537965 DDX21Q9NR30 783 aaKnown RBP eCLIP7.02□□□□□ -1.291e-323■■■□□ 15.6
SNHG1-207ENST00000537965 GPC6Q9Y625 555 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-207ENST00000537965 GJA3Q9Y6H8 435 aa7.02□□□□□ -1.29
SNHG1-207ENST00000537965 ANKRD36CQ5JPF3 1778 aa7.01□□□□□ -1.29
SNHG1-207ENST00000537965 IBTKQ9P2D0 1353 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-207ENST00000537965 CA12O43570 354 aa7.01□□□□□ -1.29
SNHG1-207ENST00000537965 HSPA8P11142 646 aaKnown RBP7.01□□□□□ -1.29
SNHG1-207ENST00000537965 HOXA10P31260 410 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-207ENST00000537965 MAP2K2P36507 400 aa7.01□□□□□ -1.29
SNHG1-207ENST00000537965 PIP4K2AP48426 406 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms