RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 IGF2BP3O00425 579 aaKnown RBP eCLIP28.07■■■□□ 2.08
CHFR-215ENST00000537551 CTNND1O60716 968 aaKnown RBP28.07■■■□□ 2.08
CHFR-215ENST00000537551 GLRX3O76003 335 aaKnown RBP28.07■■■□□ 2.08
CHFR-215ENST00000537551 IGHDP01880 384 aa28.07■■■□□ 2.08
CHFR-215ENST00000537551 SNAPC2Q13487 334 aa28.07■■■□□ 2.08
CHFR-215ENST00000537551 SLC4A8Q2Y0W8 1093 aa28.07■■■□□ 2.08
CHFR-215ENST00000537551 SLFNL1Q499Z3 407 aa28.07■■■□□ 2.08
CHFR-215ENST00000537551 B4GALNT3Q6L9W6 998 aa28.07■■■□□ 2.08
CHFR-215ENST00000537551 CRACR2BQ8N4Y2 399 aaPredicted RBP28.07■■■□□ 2.08
CHFR-215ENST00000537551 UBE3CQ15386 1083 aa28.06■■■□□ 2.08
CHFR-215ENST00000537551 FOXP4Q8IVH2 680 aaPredicted RBP28.06■■■□□ 2.08
CHFR-215ENST00000537551 CETPP11597 493 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 SMC5Q8IY18 1101 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 LCORLQ8N3X6 602 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 KBTBD3Q8NAB2 608 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 BRI3BPQ8WY22 251 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 PTPN18Q99952 460 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 ARMT1Q9H993 441 aa28.05■■■□□ 2.08
CHFR-215ENST00000537551 CDK5RAP2Q96SN8 1893 aa28.04■■■□□ 2.08
CHFR-215ENST00000537551 PI4K2BQ8TCG2 481 aa28.04■■■□□ 2.08
CHFR-215ENST00000537551 ZHX2Q9Y6X8 837 aa28.04■■■□□ 2.08
CHFR-215ENST00000537551 MBD4O95243 580 aa28.03■■■□□ 2.08
CHFR-215ENST00000537551 CHGBP05060 677 aa28.03■■■□□ 2.08
CHFR-215ENST00000537551 PTPRAP18433 802 aa28.03■■■□□ 2.08
CHFR-215ENST00000537551 LNPKQ9C0E8 428 aa28.03■■■□□ 2.08
CHFR-215ENST00000537551 FOCADQ5VW36 1801 aa28.02■■■□□ 2.08
CHFR-215ENST00000537551 POLR3DP05423 398 aaPredicted RBP28.02■■■□□ 2.08
CHFR-215ENST00000537551 TTC6Q86TZ1 520 aa28.02■■■□□ 2.08
CHFR-215ENST00000537551 CASP8AP2Q9UKL3 1982 aa28.02■■■□□ 2.08
CHFR-215ENST00000537551 LRRFIP1Q32MZ4 808 aaKnown RBP28.01■■■□□ 2.07
CHFR-215ENST00000537551 SDR42E1Q8WUS8 393 aa28.01■■■□□ 2.07
CHFR-215ENST00000537551 CFHR5Q9BXR6 569 aa28.01■■■□□ 2.07
CHFR-215ENST00000537551 SALL3Q9BXA9 1300 aa28■■■□□ 2.07
CHFR-215ENST00000537551 GPR25O00155 361 aa28■■■□□ 2.07
CHFR-215ENST00000537551 CAP2P40123 477 aa28■■■□□ 2.07
CHFR-215ENST00000537551 R3HDMLQ9H3Y0 253 aa28■■■□□ 2.07
CHFR-215ENST00000537551 MCM9Q9NXL9 1143 aa28■■■□□ 2.07
CHFR-215ENST00000537551 KCNH4Q9UQ05 1017 aa28■■■□□ 2.07
CHFR-215ENST00000537551 CXCL11O14625 94 aa27.99■■■□□ 2.07
CHFR-215ENST00000537551 RNF113AO15541 343 aaKnown RBP27.99■■■□□ 2.07
CHFR-215ENST00000537551 PDE1AP54750 535 aa27.99■■■□□ 2.07
CHFR-215ENST00000537551 METTL16Q86W50 562 aaKnown RBP27.99■■■□□ 2.07
CHFR-215ENST00000537551 PUS7LQ9H0K6 701 aaKnown RBP27.99■■■□□ 2.07
CHFR-215ENST00000537551 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.99■■■□□ 2.07
CHFR-215ENST00000537551 MYH1P12882 1939 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 PRKAB2O43741 272 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 ZFYP08048 801 aaPredicted RBP27.98■■■□□ 2.07
CHFR-215ENST00000537551 RRP1BQ14684 758 aaKnown RBP27.98■■■□□ 2.07
CHFR-215ENST00000537551 CHD1LQ86WJ1 897 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 FAM43AQ8N2R8 423 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 FSD1Q9BTV5 496 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 DNAJC18Q9H819 358 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 DCP1AQ9NPI6 582 aaPredicted RBP27.98■■■□□ 2.07
CHFR-215ENST00000537551 STAP2Q9UGK3 403 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 SERPINB13Q9UIV8 391 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 LAMB1P07942 1786 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 MYH7P12883 1935 aa27.98■■■□□ 2.07
CHFR-215ENST00000537551 BTBD19C9JJ37 291 aa27.97■■■□□ 2.07
CHFR-215ENST00000537551 NUCB1Q02818 461 aa27.97■■■□□ 2.07
CHFR-215ENST00000537551 CRHR2Q13324 411 aa27.97■■■□□ 2.07
CHFR-215ENST00000537551 TAF1CQ15572 869 aaPredicted RBP27.97■■■□□ 2.07
CHFR-215ENST00000537551 CCDC84Q86UT8 332 aaPredicted RBP27.97■■■□□ 2.07
CHFR-215ENST00000537551 ZNF296Q8WUU4 475 aaPredicted RBP27.97■■■□□ 2.07
CHFR-215ENST00000537551 AFG3L2Q9Y4W6 797 aa27.97■■■□□ 2.07
CHFR-215ENST00000537551 SLC4A4Q9Y6R1 1079 aa27.97■■■□□ 2.07
CHFR-215ENST00000537551 PLCD1P51178 756 aa27.96■■■□□ 2.07
CHFR-215ENST00000537551 APPBP2Q92624 585 aa27.96■■■□□ 2.07
CHFR-215ENST00000537551 DDRGK1Q96HY6 314 aa27.96■■■□□ 2.07
CHFR-215ENST00000537551 EHD4Q9H223 541 aa27.96■■■□□ 2.07
CHFR-215ENST00000537551 ZFYVE28Q9HCC9 887 aa27.96■■■□□ 2.07
CHFR-215ENST00000537551 ATP8A2Q9NTI2 1148 aa27.96■■■□□ 2.07
CHFR-215ENST00000537551 DOCK1Q14185 1865 aa27.95■■■□□ 2.07
CHFR-215ENST00000537551 TRIM75PA6NK02 468 aa27.95■■■□□ 2.06
CHFR-215ENST00000537551 FKTNO75072 461 aa27.95■■■□□ 2.06
CHFR-215ENST00000537551 NOM1Q5C9Z4 860 aaKnown RBP27.95■■■□□ 2.06
CHFR-215ENST00000537551 SIPA1L1O43166 1804 aa27.95■■■□□ 2.06
CHFR-215ENST00000537551 USP17L5A8MUK1 530 aa27.94■■■□□ 2.06
CHFR-215ENST00000537551 GDF11O95390 407 aa27.94■■■□□ 2.06
CHFR-215ENST00000537551 OSBP2Q969R2 916 aa27.94■■■□□ 2.06
CHFR-215ENST00000537551 ASNSP08243 561 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 DGKZQ13574 1117 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 GADL1Q6ZQY3 521 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 FASTKD5Q7L8L6 764 aaKnown RBP27.93■■■□□ 2.06
CHFR-215ENST00000537551 ANKRD23Q86SG2 305 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 AMOTL1Q8IY63 956 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 TBC1D2Q9BYX2 928 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 AS3MTQ9HBK9 375 aa27.93■■■□□ 2.06
CHFR-215ENST00000537551 ZCCHC17Q9NP64 241 aaKnown RBP27.93■■■□□ 2.06
CHFR-215ENST00000537551 A0A0G2JLL6 359 aaPredicted RBP27.92■■■□□ 2.06
CHFR-215ENST00000537551 SPP2Q13103 211 aa27.92■■■□□ 2.06
CHFR-215ENST00000537551 PRRT2Q7Z6L0 340 aaPredicted RBP27.92■■■□□ 2.06
CHFR-215ENST00000537551 ZNF280CQ8ND82 737 aa27.92■■■□□ 2.06
CHFR-215ENST00000537551 EVI5LQ96CN4 794 aa27.92■■■□□ 2.06
CHFR-215ENST00000537551 STRBPQ96SI9 672 aaKnown RBP27.92■■■□□ 2.06
CHFR-215ENST00000537551 GINM1Q9NU53 330 aa27.92■■■□□ 2.06
CHFR-215ENST00000537551 NAV1Q8NEY1 1877 aa27.91■■■□□ 2.06
CHFR-215ENST00000537551 PDHXO00330 501 aa27.91■■■□□ 2.06
CHFR-215ENST00000537551 CYP2D6P10635 497 aa27.91■■■□□ 2.06
CHFR-215ENST00000537551 CERKLQ49MI3 558 aaPredicted RBP27.91■■■□□ 2.06
CHFR-215ENST00000537551 TATDN1Q6P1N9 297 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms