RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PTPRAP18433 802 aa20.88■□□□□ 0.93
SFSWAP-205ENST00000537164 SLC9C2Q5TAH2 1124 aa20.88■□□□□ 0.93
SFSWAP-205ENST00000537164 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
SFSWAP-205ENST00000537164 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
SFSWAP-205ENST00000537164 BOLA2Q9H3K6 86 aa20.88■□□□□ 0.93
SFSWAP-205ENST00000537164 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.88■□□□□ 0.93
SFSWAP-205ENST00000537164 MOGSQ13724 837 aa20.87■□□□□ 0.93
SFSWAP-205ENST00000537164 MAPKAPK5Q8IW41 473 aa20.87■□□□□ 0.93
SFSWAP-205ENST00000537164 ECHDC1Q9NTX5 307 aa20.87■□□□□ 0.93
SFSWAP-205ENST00000537164 BTBD19C9JJ37 291 aa20.86■□□□□ 0.93
SFSWAP-205ENST00000537164 FOXP4Q8IVH2 680 aaPredicted RBP20.86■□□□□ 0.93
SFSWAP-205ENST00000537164 EDC3Q96F86 508 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-205ENST00000537164 PICK1Q9NRD5 415 aa20.86■□□□□ 0.93
SFSWAP-205ENST00000537164 AFG3L2Q9Y4W6 797 aa20.86■□□□□ 0.93
SFSWAP-205ENST00000537164 ZNF532Q9HCE3 1301 aa20.85■□□□□ 0.93
SFSWAP-205ENST00000537164 FAM196BA6NMK8 535 aa20.85■□□□□ 0.93
SFSWAP-205ENST00000537164 PKN2Q16513 984 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-205ENST00000537164 ANKRD23Q86SG2 305 aa20.85■□□□□ 0.93
SFSWAP-205ENST00000537164 PALD1Q9ULE6 856 aa20.85■□□□□ 0.93
SFSWAP-205ENST00000537164 ZHX2Q9Y6X8 837 aa20.85■□□□□ 0.93
SFSWAP-205ENST00000537164 A0A0G2JLL6 359 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 MAGEB6P1A0A0J9YX57 407 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 ADD2P35612 726 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 CAP2P40123 477 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 HDAC1Q13547 482 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 TAF1CQ15572 869 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 PRRT2Q7Z6L0 340 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 DNAJC18Q9H819 358 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 ZFYVE28Q9HCC9 887 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 NAV1Q8NEY1 1877 aa20.84■□□□□ 0.93
SFSWAP-205ENST00000537164 RRP1BQ14684 758 aaKnown RBP20.83■□□□□ 0.93
SFSWAP-205ENST00000537164 TBC1D2Q9BYX2 928 aa20.83■□□□□ 0.93
SFSWAP-205ENST00000537164 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.932e-14■□□□□ 10.4
SFSWAP-205ENST00000537164 TLR2O60603 784 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 HLA-DOAP06340 250 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 USP5P45974 858 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 GPATCH3Q96I76 525 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 EHD4Q9H223 541 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 GINM1Q9NU53 330 aa20.82■□□□□ 0.92
SFSWAP-205ENST00000537164 TTC41PQ6P2S7 1318 aa20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 CAPN15O75808 1086 aa20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 SP3Q02447 781 aa20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 GPAT2Q6NUI2 795 aa20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 FASTKD5Q7L8L6 764 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 ERO1AQ96HE7 468 aa20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 CRNKL1Q9BZJ0 848 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 LOC285556D6RIA3 1793 aa20.81■□□□□ 0.92
SFSWAP-205ENST00000537164 CENPFP49454 3210 aa20.8■□□□□ 0.92
SFSWAP-205ENST00000537164 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
SFSWAP-205ENST00000537164 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-205ENST00000537164 SAP30BPQ9UHR5 308 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-205ENST00000537164 SLC45A1Q9Y2W3 748 aa20.8■□□□□ 0.92
SFSWAP-205ENST00000537164 ADGRA2Q96PE1 1338 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 SALL3Q9BXA9 1300 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 PDHXO00330 501 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 ASNSP08243 561 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 ZSCAN25Q6NSZ9 544 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 TATDN1Q6P1N9 297 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 TTC6Q86TZ1 520 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 CRACR2BQ8N4Y2 399 aaPredicted RBP20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
SFSWAP-205ENST00000537164 USP17L5A8MUK1 530 aa20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 FBXO46Q6PJ61 603 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 C17orf99Q6UX52 265 aa20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 LCORLQ8N3X6 602 aa20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 KBTBD3Q8NAB2 608 aa20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 ZNF280CQ8ND82 737 aa20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 WDR18Q9BV38 432 aa20.78■□□□□ 0.92
SFSWAP-205ENST00000537164 JAG1P78504 1218 aa20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 OTOP1Q7RTM1 612 aa20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 CCDC84Q86UT8 332 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 PROCA1Q8NCQ7 364 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 PI4K2BQ8TCG2 481 aa20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 DCP1AQ9NPI6 582 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 TAOK2Q9UL54 1235 aa20.77■□□□□ 0.92
SFSWAP-205ENST00000537164 BAZ2AQ9UIF9 1905 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 TRIM75PA6NK02 468 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 ERC2O15083 957 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 CHGBP05060 677 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 PLCD1P51178 756 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 CAP1Q01518 475 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 GABPAQ06546 454 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 SLFNL1Q499Z3 407 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 SH3D19Q5HYK7 790 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 TSHZ3Q63HK5 1081 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 CD99L2Q8TCZ2 262 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 ARMT1Q9H993 441 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 AS3MTQ9HBK9 375 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 ATP8A2Q9NTI2 1148 aa20.76■□□□□ 0.91
SFSWAP-205ENST00000537164 GLRX3O76003 335 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 MBD4O95243 580 aa20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 SPP2Q13103 211 aa20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 SDR42E1Q8WUS8 393 aa20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 PARK7Q99497 189 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 AGTPBP1Q9UPW5 1226 aa20.75■□□□□ 0.91
SFSWAP-205ENST00000537164 HPS5Q9UPZ3 1129 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms